Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_777576 18 1935 NP_055561 17 3301 XP_005246260 17 3301 XP_005246259 17 3301 XP_005246258 17 3301 XP_005246257 17 3301 XP_006711972 17 3301 NP_005693 17 3301 NP_115495 17 4312 NP_001269614 17 4312 NP_001269613 17 4312 NP_078957 17 4312 NP_001269615 17 4312 XP_005261801 17 4312 XP_005261800 17 4312 XP_005261799 17 4312 XP_005261798 17 4312 NP_001093260 16 5631 NP_001273310 16 5631 NP_115824 16 5631 NP_997299 16 5631 NP_001273308 16 5631 NP_001138669 16 5631 NP_001273309 16 5631 XP_005276416 16 5631 XP_006725079 16 5631 XP_006725078 16 5631 XP_006715643 16 5631 XP_006715642 16 5631 NP_001160132 16 7355 NP_061850 16 7355 NP_851820 16 7355 NP_543008 16 7355 NP_039225 16 7355 NP_001269340 16 7355 NP_002703 16 7355 NP_001269338 16 7355 NP_001269343 16 7355 NP_001269339 16 7355 NP_001269342 16 7355 NP_001269341 16 7355 XP_005275582 16 7355 XP_005275581 16 7355 XP_005275423 16 7355 XP_005275422 16 7355 XP_005275288 16 7355 XP_005275287 16 7355 XP_005275147 16 7355 XP_005275146 16 7355 XP_005274992 16 7355 XP_005274991 16 7355 XP_005272846 16 7355 XP_005272845 16 7355 XP_005274901 16 7355 XP_005274900 16 7355 XP_005262336 16 7355 XP_006724726 16 7355 XP_006724725 16 7355 XP_005254103 16 7355 XP_005254102 16 7355 XP_005254101 16 7355 XP_005254100 16 7355 XP_005249059 16 7355 XP_005249058 16 7355 NP_543146 16 7355 NP_001107854 15 9605 NP_001070651 15 9605 NP_000539 15 9605 XP_005255589 15 9605 XP_005255588 15 9605 XP_005255587 15 9605 XP_005255586 15 9605 XP_005255585 15 9605 XP_005255584 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLCLKQKST 9 T CLKQKST Sbjct: 415 TPCLKQKST 423>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TLCLKQKST 9 T CLKQKST Sbjct: 210 TPCLKQKST 218>NP_777576 Length = 1749 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLKQKST 9 CLKQK+T Sbjct: 1577 CLKQKNT 1583>NP_055561 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 44 TLCLKQ 49>XP_005246260 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 44 TLCLKQ 49>XP_005246259 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 44 TLCLKQ 49>XP_005246258 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 44 TLCLKQ 49>XP_005246257 Length = 292 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 44 TLCLKQ 49>XP_006711972 Length = 300 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCLKQ Sbjct: 52 TLCLKQ 57>NP_005693 Length = 437 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQKS Sbjct: 240 CLKQKS 245>NP_115495 Length = 6306 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TLCLKQKS 8 TLCLK+++ Sbjct: 2441 TLCLKEQA 2448>NP_001269614 Length = 225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 48 TLCREQKS 55>NP_001269613 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 48 TLCREQKS 55>NP_078957 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 48 TLCREQKS 55>NP_001269615 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 48 TLCREQKS 55>XP_005261801 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 48 TLCREQKS 55>XP_005261800 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 41 TLCREQKS 48>XP_005261799 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 41 TLCREQKS 48>XP_005261798 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 TLC +QKS Sbjct: 41 TLCREQKS 48>NP_001093260 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LCLKQKS 8 +CLK+KS Sbjct: 153 VCLKEKS 159>NP_001273310 Length = 242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 79 LCLQGKST 86>NP_115824 Length = 910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 747 LCLQGKST 754>NP_997299 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 T+CL +KS Sbjct: 857 TICLPEKS 864>NP_001273308 Length = 922 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 759 LCLQGKST 766>NP_001138669 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 T+CL +KS Sbjct: 857 TICLPEKS 864>NP_001273309 Length = 933 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 770 LCLQGKST 777>XP_005276416 Length = 1583 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TLCLKQKS 8 T+CL +KS Sbjct: 846 TICLPEKS 853>XP_006725079 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 747 LCLQGKST 754>XP_006725078 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 747 LCLQGKST 754>XP_006715643 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 747 LCLQGKST 754>XP_006715642 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LCLKQKST 9 LCL+ KST Sbjct: 747 LCLQGKST 754>NP_001160132 Length = 808 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 311 CLRQKS 316>NP_061850 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 331 CLRQKS 336>NP_851820 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 351 CLRQKS 356>NP_543008 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQK+ Sbjct: 234 CLKQKA 239>NP_039225 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>NP_001269340 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 59 TLCLRQ 64>NP_002703 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 102 TLCLRQ 107>NP_001269338 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 59 TLCLRQ 64>NP_001269343 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 43 TLCLRQ 48>NP_001269339 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 102 TLCLRQ 107>NP_001269342 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 43 TLCLRQ 48>NP_001269341 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TLCLKQ 6 TLCL+Q Sbjct: 86 TLCLRQ 91>XP_005275582 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275581 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275423 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275422 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275288 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275287 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275147 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005275146 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005274992 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005274991 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005272846 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005272845 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005274901 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005274900 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005262336 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 351 CLRQKS 356>XP_006724726 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 234 CLRQKS 239>XP_006724725 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CL+QKS Sbjct: 288 CLRQKS 293>XP_005254103 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQK+ Sbjct: 234 CLKQKA 239>XP_005254102 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQK+ Sbjct: 234 CLKQKA 239>XP_005254101 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQK+ Sbjct: 234 CLKQKA 239>XP_005254100 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQK+ Sbjct: 234 CLKQKA 239>XP_005249059 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>XP_005249058 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LCLKQKST 9 LC+KQ T Sbjct: 306 LCIKQTET 313>NP_543146 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TLCLKQKST 9 T+C K K+T Sbjct: 1194 TICTKGKNT 1202>NP_001107854 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 696 CLKQES 701>NP_001070651 Length = 1740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 696 CLKQES 701>NP_000539 Length = 1807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 696 CLKQES 701>XP_005255589 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792>XP_005255588 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792>XP_005255587 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792>XP_005255586 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792>XP_005255585 Length = 1875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792>XP_005255584 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLKQKS 8 CLKQ+S Sbjct: 787 CLKQES 792Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.120 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 753,319 Number of extensions: 989 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |