Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_001010872 17 3301 XP_006715085 17 3301 NP_787036 17 4312 NP_001257620 17 4312 XP_005270830 17 4312 NP_001035799 17 4312 NP_001265662 16 7355 NP_473455 16 7355 NP_687034 16 7355 XP_005276374 16 7355 XP_005273748 16 7355 XP_005276074 16 7355 NP_036313 15 9605 NP_055196 15 9605 NP_001035197 15 9605 NP_683692 15 9605 NP_001037853 15 9605 NP_001037852 15 9605 NP_077317 15 9605 XP_005259899 15 9605 XP_005259898 15 9605 XP_005267591 15 9605 XP_005267590 15 9605 XP_005267589 15 9605 XP_005267588 15 9605 XP_006720179 15 9605 XP_005248208 15 9605 XP_005248207 15 9605 XP_006714021 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TKSSKTMH 8 TKSSKTMH Sbjct: 1537 TKSSKTMH 1544>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 TKSSKTMH 8 TKSSKTMH Sbjct: 1332 TKSSKTMH 1339>NP_001010872 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSSKTMH 8 KSSK+MH Sbjct: 705 KSSKSMH 711>XP_006715085 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSSKTMH 8 KSSK+MH Sbjct: 705 KSSKSMH 711>NP_787036 Length = 532 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKSSKTMH 8 T+SSKT H Sbjct: 451 TESSKTAH 458>NP_001257620 Length = 585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKSSKTMH 8 T+SSKT H Sbjct: 504 TESSKTAH 511>XP_005270830 Length = 236 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSKTMH 8 SSKTMH Sbjct: 101 SSKTMH 106>NP_001035799 Length = 272 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SSKTMH 8 SSKTMH Sbjct: 101 SSKTMH 106>NP_001265662 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSSKTMHA 9 K S+T+HA Sbjct: 605 KQSRTVHA 612>NP_473455 Length = 731 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSSKTMHA 9 K S+T+HA Sbjct: 668 KQSRTVHA 675>NP_687034 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KSSKTMHA 9 K S+T+HA Sbjct: 490 KQSRTVHA 497>XP_005276374 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 27 SAKTLHA 33>XP_005273748 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 27 SAKTLHA 33>XP_005276074 Length = 264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 27 SAKTLHA 33>NP_036313 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 339 SNKTIHA 345>NP_055196 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>NP_001035197 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>NP_683692 Length = 3051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKSSKT 6 TKSSKT Sbjct: 526 TKSSKT 531>NP_001037853 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKSSKTMH 8 TKSS T H Sbjct: 156 TKSSLTRH 163>NP_001037852 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKSSKTMH 8 TKSS T H Sbjct: 163 TKSSLTRH 170>NP_077317 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKSSKTMH 8 TKSS T H Sbjct: 163 TKSSLTRH 170>XP_005259899 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 367 SNKTIHA 373>XP_005259898 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSKTMHA 9 S+KT+HA Sbjct: 368 SNKTIHA 374>XP_005267591 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>XP_005267590 Length = 1394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>XP_005267589 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>XP_005267588 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>XP_006720179 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKSSKTMHA 9 TKS++T H+ Sbjct: 618 TKSTETEHS 626>XP_005248208 Length = 3097 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKSSKT 6 TKSSKT Sbjct: 526 TKSSKT 531>XP_005248207 Length = 3098 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKSSKT 6 TKSSKT Sbjct: 526 TKSSKT 531>XP_006714021 Length = 3112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKSSKT 6 TKSSKT Sbjct: 526 TKSSKT 531Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.0931 0.229 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,557 Number of extensions: 434 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |