Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 XP_006723719 17 4312 NP_001010872 16 5631 XP_006715085 16 5631 XP_006712581 16 5631 XP_005246132 16 5631 NP_002535 16 7355 NP_006502 16 7355 NP_116564 15 9605 NP_079150 15 9605 NP_005325 15 9605 NP_004534 15 9605 NP_001093156 15 9605 NP_001258137 15 9605 NP_071336 15 9605 NP_001157980 15 9605 NP_001157979 15 9605 NP_775100 15 9605 NP_065878 15 9605 XP_005274721 15 9605 XP_006724879 15 9605 XP_006724878 15 9605 XP_005262224 15 9605 XP_005262223 15 9605 XP_005262222 15 9605 XP_006714541 15 9605 XP_005263212 15 9605 XP_005263211 15 9605 XP_005246675 15 9605 XP_005246674 15 9605 XP_005246673 15 9605 XP_005246672 15 9605 XP_005246670 15 9605 XP_005246669 15 9605 XP_005246668 15 9605 XP_005246667 15 9605 XP_005246665 15 9605 XP_006712605 15 9605 XP_006712604 15 9605 XP_005246663 15 9605 XP_005246660 15 9605 XP_005246661 15 9605 XP_005246659 15 9605 XP_005246658 15 9605 XP_005246657 15 9605 XP_005246656 15 9605 XP_005246655 15 9605 XP_005246654 15 9605 XP_005246653 15 9605 XP_005246652 15 9605 XP_005246649 15 9605 XP_005246651 15 9605 XP_005246650 15 9605 XP_005246648 15 9605 XP_005246647 15 9605 XP_006710974 15 9605 XP_006710973 15 9605 XP_006710972 15 9605 XP_006710971 15 9605 XP_006710970 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKNLSSNKA 9 TKNLSSN+A Sbjct: 837 TKNLSSNEA 845>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKNLSSNKA 9 TKNLSSN+A Sbjct: 837 TKNLSSNEA 845>XP_006723719 Length = 311 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KNLSSNKA 9 +NLSSNK+ Sbjct: 271 ENLSSNKS 278>NP_001010872 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNLSSNKA 9 +NLS NKA Sbjct: 787 ENLSKNKA 794>XP_006715085 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNLSSNKA 9 +NLS NKA Sbjct: 787 ENLSKNKA 794>XP_006712581 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNLSSNKA 9 +NLSSN A Sbjct: 634 RNLSSNSA 641>XP_005246132 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KNLSSNKA 9 +NLSSN A Sbjct: 634 RNLSSNSA 641>NP_002535 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NLSSNK 8 NLSSNK Sbjct: 152 NLSSNK 157>NP_006502 Length = 617 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TKNLSSN 7 TK+LSSN Sbjct: 511 TKSLSSN 517>NP_116564 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 189 TLNLSKNK 196>NP_079150 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 490 TANLTVNKA 498>NP_005325 Length = 2035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TKNLSSNK 8 T N+SSN+ Sbjct: 1437 TSNMSSNQ 1444>NP_004534 Length = 6669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 6076 KNLSSQK 6082>NP_001093156 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 300 TLNLSKNK 307>NP_001258137 Length = 8560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7812 KNLSSQK 7818>NP_071336 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 300 TLNLSKNK 307>NP_001157980 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>NP_001157979 Length = 8525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>NP_775100 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TKNLSSN 7 TKN SSN Sbjct: 249 TKNKSSN 255>NP_065878 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TKNLSSN 7 TKN++SN Sbjct: 48 TKNVNSN 54>XP_005274721 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TKNLSSNK 8 T N+SSN+ Sbjct: 1437 TSNMSSNQ 1444>XP_006724879 Length = 2079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TKNLSSNK 8 T N+SSN+ Sbjct: 1437 TSNMSSNQ 1444>XP_006724878 Length = 2080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TKNLSSNK 8 T N+SSN+ Sbjct: 1437 TSNMSSNQ 1444>XP_005262224 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 126 TLNLSKNK 133>XP_005262223 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 126 TLNLSKNK 133>XP_005262222 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKNLSSNK 8 T NLS NK Sbjct: 189 TLNLSKNK 196>XP_006714541 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KNLSSNK 8 +NL+SNK Sbjct: 361 RNLTSNK 367>XP_005263212 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TKNLSSN 7 TKN++SN Sbjct: 48 TKNVNSN 54>XP_005263211 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TKNLSSN 7 TKN++SN Sbjct: 48 TKNVNSN 54>XP_005246675 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 4475 KNLSSQK 4481>XP_005246674 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 6805 KNLSSQK 6811>XP_005246673 Length = 8018 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246672 Length = 8277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246670 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7534 KNLSSQK 7540>XP_005246669 Length = 8282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7534 KNLSSQK 7540>XP_005246668 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246667 Length = 8308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246665 Length = 8339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_006712605 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_006712604 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246663 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246660 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246661 Length = 8370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246659 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246658 Length = 8401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246657 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246656 Length = 8432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246655 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246654 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246653 Length = 8463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246652 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246649 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246651 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246650 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246648 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_005246647 Length = 8494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KNLSSNK 8 KNLSS K Sbjct: 7777 KNLSSQK 7783>XP_006710974 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 132 TANLTVNKA 140>XP_006710973 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 132 TANLTVNKA 140>XP_006710972 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 490 TANLTVNKA 498>XP_006710971 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 490 TANLTVNKA 498>XP_006710970 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKNLSSNKA 9 T NL+ NKA Sbjct: 490 TANLTVNKA 498Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.280 0.0951 0.215 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,142 Number of extensions: 784 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |