Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_005849 17 4312 XP_006726892 17 4312 XP_006726881 17 4312 XP_006726878 17 4312 XP_003403538 17 4312 XP_006724469 17 4312 XP_006724467 17 4312 XP_006724461 17 4312 XP_005259763 17 4312 XP_006710191 17 4312 NP_115811 16 5631 NP_001456 16 5631 NP_955367 16 5631 NP_036260 16 5631 NP_001230022 16 5631 XP_006714529 16 5631 XP_006714528 16 5631 XP_006714527 16 5631 XP_006710516 16 5631 NP_002449 16 7355 NP_001073936 16 7355 NP_078966 15 9605 NP_003491 15 9605 XP_006726157 15 9605 XP_005275612 15 9605 XP_005275610 15 9605 XP_006726064 15 9605 XP_005275460 15 9605 XP_006715157 15 9605 XP_005249149 15 9605 XP_006713403 15 9605 XP_005265563 15 9605 XP_005265562 15 9605 NP_002254 15 9605>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKITTSSTY 9 TKITT+STY Sbjct: 411 TKITTTSTY 419>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKITTSSTY 9 TKITT+STY Sbjct: 411 TKITTTSTY 419>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TKITTSSTY 9 TKITT+STY Sbjct: 411 TKITTTSTY 419>NP_005849 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 T +TT +TY Sbjct: 43 TSVTTGATY 51>XP_006726892 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>XP_006726881 Length = 486 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 69 TKVTSGSTF 77>XP_006726878 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>XP_003403538 Length = 646 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>XP_006724469 Length = 2373 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>XP_006724467 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 33 TKVTSGSTF 41>XP_006724461 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>XP_005259763 Length = 679 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 T +TT +TY Sbjct: 30 TSVTTGATY 38>XP_006710191 Length = 1582 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK+T+ ST+ Sbjct: 28 TKVTSGSTF 36>NP_115811 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TKITTSSTY 9 TK++T+ TY Sbjct: 300 TKMSTAGTY 308>NP_001456 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 757 TKVTTSIT 764>NP_955367 Length = 783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 711 TKVTTSIT 718>NP_036260 Length = 919 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITTSSTY 9 +TT+STY Sbjct: 56 VTTASTY 62>NP_001230022 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 767 TKVTTSIT 774>XP_006714529 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 757 TKVTTSIT 764>XP_006714528 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 757 TKVTTSIT 764>XP_006714527 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKITTSST 8 TK+TTS T Sbjct: 757 TKVTTSIT 764>XP_006710516 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ITTSSTY 9 +TT+STY Sbjct: 56 VTTASTY 62>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TKITTSST 8 TK+TT++T Sbjct: 3694 TKLTTTAT 3701>NP_001073936 Length = 1848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ITTSSTY 9 +TTS TY Sbjct: 382 VTTSETY 388>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KITTSSTY 9 K+T SST+ Sbjct: 1164 KVTMSSTF 1171Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TKITTSSTY 9 TKI STY Sbjct: 6939 TKIKRESTY 6947>NP_003491 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 TK++ S TY Sbjct: 428 TKLSASCTY 436>XP_006726157 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_005275612 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 19 TKITTS 24>XP_005275610 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_006726064 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_005275460 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_006715157 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_005249149 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65>XP_006713403 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 TK++ S TY Sbjct: 330 TKLSASCTY 338>XP_005265563 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 TK++ S TY Sbjct: 358 TKLSASCTY 366>XP_005265562 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TKITTSSTY 9 TK++ S TY Sbjct: 428 TKLSASCTY 436>NP_002254 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKITTS 6 TKITTS Sbjct: 60 TKITTS 65Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.101 0.241 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 281,894 Number of extensions: 329 Number of successful extensions: 38 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |