Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 299 NP_872293 17 3301 XP_005251817 17 3301 XP_006717052 17 3301 NP_699174 17 4312 NP_542166 16 5631 NP_056357 16 5631 NP_689771 16 5631 NP_001274429 16 5631 NP_001274428 16 5631 NP_006438 16 7355 NP_001001992 16 7355 NP_056323 16 7355 NP_001027582 16 7355 NP_078911 16 7355 NP_001171646 16 7355 NP_001171647 16 7355 XP_005252185 16 7355 XP_006717294 16 7355 XP_005252184 16 7355 XP_005252183 16 7355 XP_006711313 16 7355 NP_115813 15 9605 NP_002678 15 9605 NP_079276 15 9605 NP_001158293 15 9605 NP_036553 15 9605 NP_001092286 15 9605 NP_001269847 15 9605 NP_065069 15 9605 NP_001269846 15 9605 XP_005260522 15 9605 XP_005260521 15 9605 XP_005260520 15 9605 XP_005260519 15 9605 XP_006718561 15 9605 XP_005265906 15 9605 XP_006714896 15 9605 XP_006712835 15 9605 XP_006712834 15 9605 XP_006712833 15 9605 XP_006712832 15 9605 XP_006712831 15 9605 XP_006712830 15 9605 XP_006712829 15 9605 XP_005271331 15 9605 XP_006711040 15 9605 XP_006711039 15 9605 NP_079429 15 9605 NP_001004690 15 9605>NP_004110 Length = 993 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 KANRKVFG 9 KANRKVFG Sbjct: 486 KANRKVFG 493>NP_872293 Length = 652 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TKANRKVFG 9 T+A+ KVFG Sbjct: 25 TRADSKVFG 33>XP_005251817 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TKANRKVFG 9 T+A+ KVFG Sbjct: 25 TRADSKVFG 33>XP_006717052 Length = 616 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TKANRKVFG 9 T+A+ KVFG Sbjct: 25 TRADSKVFG 33>NP_699174 Length = 440 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKANRKVF 8 TKA RKV+ Sbjct: 128 TKAKRKVY 135>NP_542166 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKANRK 6 TKANRK Sbjct: 597 TKANRK 602>NP_056357 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TKANRK 6 TKANRK Sbjct: 597 TKANRK 602>NP_689771 Length = 695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKANRKVF 8 TKA RK F Sbjct: 28 TKAKRKAF 35>NP_001274429 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKANRKVF 8 TKA RK F Sbjct: 12 TKAKRKAF 19>NP_001274428 Length = 702 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TKANRKVF 8 TKA RK F Sbjct: 28 TKAKRKAF 35>NP_006438 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKANRKVF 8 T ANR+VF Sbjct: 619 TLANREVF 626>NP_001001992 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKANRKVF 8 T ANR+VF Sbjct: 618 TLANREVF 625>NP_056323 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NRK+FG Sbjct: 515 NRKMFG 520>NP_001027582 Length = 823 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TKANRKVF 8 T ANR+VF Sbjct: 619 TLANREVF 626>NP_078911 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 379 NKKVFG 384>NP_001171646 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NRK+FG Sbjct: 515 NRKMFG 520>NP_001171647 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NRK+FG Sbjct: 515 NRKMFG 520>XP_005252185 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 223 NKKVFG 228>XP_006717294 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 379 NKKVFG 384>XP_005252184 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 379 NKKVFG 384>XP_005252183 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 379 NKKVFG 384>XP_006711313 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NRK+FG Sbjct: 20 NRKMFG 25>NP_115813 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NR+VFG Sbjct: 350 NREVFG 355>NP_002678 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NR++FG Sbjct: 142 NRRIFG 147>NP_079276 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>NP_001158293 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>NP_036553 Length = 1914 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ANRKVFG 9 +N KVFG Sbjct: 928 SNEKVFG 934>NP_001092286 Length = 2769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 1125 NQKVFG 1130>NP_001269847 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 995 KANQKLF 1001>NP_065069 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 999 KANQKLF 1005>NP_001269846 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 999 KANQKLF 1005>XP_005260522 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 999 KANQKLF 1005>XP_005260521 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 1007 KANQKLF 1013>XP_005260520 Length = 1506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 1011 KANQKLF 1017>XP_005260519 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KANRKVF 8 KAN+K+F Sbjct: 1011 KANQKLF 1017>XP_006718561 Length = 2794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+KVFG Sbjct: 1150 NQKVFG 1155>XP_005265906 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KANRKVFG 9 K +RK+FG Sbjct: 928 KPDRKLFG 935>XP_006714896 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KANRKVFG 9 K +RK+FG Sbjct: 968 KPDRKLFG 975>XP_006712835 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>XP_006712834 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>XP_006712833 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>XP_006712832 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>XP_006712831 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 120 NKKIFG 125>XP_006712830 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 120 NKKIFG 125>XP_006712829 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 N+K+FG Sbjct: 207 NKKIFG 212>XP_005271331 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NR+VFG Sbjct: 350 NREVFG 355>XP_006711040 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NR+VFG Sbjct: 350 NREVFG 355>XP_006711039 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NRKVFG 9 NR+VFG Sbjct: 363 NREVFG 368>NP_079429 Length = 1461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KANRKVFG 9 K +RK+FG Sbjct: 968 KPDRKLFG 975>NP_001004690 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TKANRKVFG 9 T+A RKV G Sbjct: 298 TRALRKVLG 306Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.132 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,051 Number of extensions: 437 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |