Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_060664 18 1935 NP_001164059 18 1935 NP_001116306 18 1935 NP_001164051 18 1935 NP_001164058 18 1935 XP_006711504 18 1935 NP_001017924 17 3301 NP_001271152 17 3301 NP_002153 17 4312 NP_443100 17 4312 NP_001363 17 4312 NP_001193594 17 4312 XP_006721530 17 4312 XP_006721529 17 4312 XP_006721528 17 4312 XP_006711694 17 4312 XP_005245671 17 4312 NP_001186438 16 5631 NP_003175 16 5631 NP_001186439 16 5631 XP_006716684 16 5631 NP_004819 16 5631 NP_065840 16 5631 NP_001128522 16 5631 NP_079285 16 7355 NP_005202 16 7355 NP_001275634 16 7355 XP_006724037 16 7355 XP_006714118 16 7355 NP_001073913 16 7355 NP_001124295 15 9605 NP_001370 15 9605 NP_733765 15 9605 NP_001672 15 9605 NP_001273004 15 9605 NP_004311 15 9605 NP_775293 15 9605 NP_003647 15 9605 NP_008985 15 9605 NP_002727 15 9605 NP_777613 15 9605 NP_777617 15 9605 NP_777614 15 9605 NP_005164 15 9605 NP_777618 15 9605 NP_777615 15 9605 XP_003960846 15 9605 XP_006722744 15 9605 XP_005266713 15 9605 XP_005256713 15 9605 XP_005253945 15 9605 XP_005271926 15 9605 XP_006714589 15 9605 XP_005271925 15 9605 XP_005265573 15 9605 XP_003846680 15 9605 NP_055728 15 9605 NP_777616 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TI VRCLAK Sbjct: 496 TIAVRCLAK 504>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TI VRCLAK Sbjct: 521 TIAVRCLAK 529>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TI VRCLAK Sbjct: 496 TIAVRCLAK 504>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TI VRCLAK Sbjct: 518 TIAVRCLAK 526>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TI VRCLAK Sbjct: 521 TIAVRCLAK 529>NP_060664 Length = 493 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 172 TLTVRCL 178>NP_001164059 Length = 428 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 107 TLTVRCL 113>NP_001116306 Length = 493 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 172 TLTVRCL 178>NP_001164051 Length = 493 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 172 TLTVRCL 178>NP_001164058 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 173 TLTVRCL 179>XP_006711504 Length = 527 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+TVRCL Sbjct: 206 TLTVRCL 212>NP_001017924 Length = 550 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITVRCLAK 9 +T+RCLA+ Sbjct: 270 VTLRCLAQ 277>NP_001271152 Length = 560 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITVRCLAK 9 +T+RCLA+ Sbjct: 270 VTLRCLAQ 277>NP_002153 Length = 547 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TITVRCLA 8 T+TV C+A Sbjct: 331 TVTVSCMA 338>NP_443100 Length = 613 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TVRCLAK 9 T RCLAK Sbjct: 403 TYRCLAK 409>NP_001363 Length = 4486 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TITVR +AK Sbjct: 271 TITVRGMAK 279>NP_001193594 Length = 613 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TVRCLAK 9 T RCLAK Sbjct: 403 TYRCLAK 409>XP_006721530 Length = 2746 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TITVR +AK Sbjct: 271 TITVRGMAK 279>XP_006721529 Length = 2817 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TITVR +AK Sbjct: 271 TITVRGMAK 279>XP_006721528 Length = 3869 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TITVRCLAK 9 TITVR +AK Sbjct: 271 TITVRGMAK 279>XP_006711694 Length = 596 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TVRCLAK 9 T RCLAK Sbjct: 386 TYRCLAK 392>XP_005245671 Length = 613 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TVRCLAK 9 T RCLAK Sbjct: 403 TYRCLAK 409>NP_001186438 Length = 270 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TITVRC 6 T+TVRC Sbjct: 35 TLTVRC 40>NP_003175 Length = 1199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TITVRCL 7 TITV CL Sbjct: 849 TITVSCL 855>NP_001186439 Length = 258 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TITVRC 6 T+TVRC Sbjct: 35 TLTVRC 40>XP_006716684 Length = 1251 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TITVRCL 7 TITV CL Sbjct: 849 TITVSCL 855>NP_004819 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TITVRC 6 T+TVRC Sbjct: 35 TLTVRC 40>NP_065840 Length = 1163 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRCLAK 9 +T+RC+A+ Sbjct: 154 VTLRCVAR 161>NP_001128522 Length = 1179 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITVRCLAK 9 +T+RC+A+ Sbjct: 154 VTLRCVAR 161>NP_079285 Length = 1140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TITVRCL 7 T+TV CL Sbjct: 24 TLTVECL 30>NP_005202 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+T+RC+ Sbjct: 37 TVTLRCV 43>NP_001275634 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TITVRCL 7 T+T+RC+ Sbjct: 37 TVTLRCV 43>XP_006724037 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TITVRC 6 T+T+RC Sbjct: 282 TLTIRC 287>XP_006714118 Length = 1129 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TITVRCL 7 T+TV CL Sbjct: 24 TLTVECL 30>NP_001073913 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TITVRC 6 T+T+RC Sbjct: 282 TLTIRC 287>NP_001124295 Length = 1632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ITVRCLAK 9 +T+RCL + Sbjct: 1298 LTLRCLVR 1305>NP_001370 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ITVRCLAK 9 +T+RCL + Sbjct: 1282 LTLRCLVR 1289>NP_733765 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 557 TLRCLA 562>NP_001672 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 557 TLRCLA 562>NP_001273004 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 433 TLRCLA 438>NP_004311 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_775293 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_003647 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 ITVRCLAK 9 + ++C+AK Sbjct: 46 VAIKCIAK 53>NP_008985 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TITVRCLAK 9 TIT+ C K Sbjct: 225 TITIECSEK 233>NP_002727 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 TV+CLA Sbjct: 370 TVKCLA 375>NP_777613 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_777617 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_777614 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_005164 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_777618 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>NP_777615 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>XP_003960846 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TITVRCLA 8 T+T +CL+ Sbjct: 229 TLTAKCLS 236>XP_006722744 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ITVRCLAK 9 +T+RCL + Sbjct: 1161 LTLRCLVR 1168>XP_005266713 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 TVRCL+ Sbjct: 746 TVRCLS 751>XP_005256713 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563>XP_005253945 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 557 TLRCLA 562>XP_005271926 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TITVRCLAK 9 TIT+ C K Sbjct: 225 TITIECSEK 233>XP_006714589 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TITVRCLAK 9 TIT+ C K Sbjct: 225 TITIECSEK 233>XP_005271925 Length = 726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TITVRCLAK 9 TIT+ C K Sbjct: 225 TITIECSEK 233>XP_005265573 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 ITVRCLAK 9 + ++C+AK Sbjct: 46 VAIKCIAK 53>XP_003846680 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TITVRCLA 8 T+T +CL+ Sbjct: 229 TLTAKCLS 236>NP_055728 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 TVRCL+ Sbjct: 746 TVRCLS 751>NP_777616 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TVRCLA 8 T+RCLA Sbjct: 558 TLRCLA 563Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.135 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 597,460 Number of extensions: 781 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |