Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 NP_689777 17 3301 NP_060360 17 3301 NP_056058 17 3301 XP_006716574 17 3301 XP_006716573 17 3301 XP_005250858 17 3301 XP_005250857 17 3301 NP_001070710 16 7355 NP_001714 15 9605 NP_443075 15 9605 NP_001258152 15 9605 NP_001092093 15 9605 NP_149438 15 9605 NP_001014765 15 9605 XP_005249383 15 9605 XP_006711892 15 9605 XP_006711891 15 9605 XP_006711890 15 9605 XP_006711889 15 9605 XP_005273367 15 9605 XP_005273366 15 9605 XP_006711888 15 9605 XP_006711887 15 9605 XP_005273364 15 9605 XP_005273362 15 9605 XP_005273361 15 9605 XP_006711886 15 9605 XP_006711885 15 9605 XP_005273359 15 9605 XP_006711884 15 9605 XP_005273357 15 9605 XP_005273356 15 9605 XP_005273358 15 9605 XP_005273355 15 9605 XP_005273353 15 9605 XP_005273352 15 9605 XP_005273354 15 9605 XP_005273349 15 9605 XP_006711883 15 9605 XP_005273350 15 9605 XP_005273351 15 9605 XP_006711882 15 9605 XP_005273348 15 9605 XP_005273346 15 9605 XP_005273347 15 9605 XP_005273345 15 9605 XP_005273344 15 9605 XP_006711109 15 9605 XP_006711108 15 9605 XP_005263595 15 9605 XP_006711107 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIQEKSTAV 9 TIQEKST V Sbjct: 235 TIQEKSTTV 243>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIQEKSTAV 9 TIQEKST V Sbjct: 30 TIQEKSTTV 38>NP_689777 Length = 3997 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>NP_060360 Length = 4022 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>NP_056058 Length = 863 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>XP_006716574 Length = 968 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>XP_006716573 Length = 1776 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>XP_005250858 Length = 4022 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>XP_005250857 Length = 4022 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TIQEKST 7 T+QEKST Sbjct: 568 TVQEKST 574>NP_001070710 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TIQEKSTAV 9 T+QEK+ A+ Sbjct: 3 TVQEKAAAL 11>NP_001714 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IQEKSTA 8 IQ+KSTA Sbjct: 1867 IQKKSTA 1873>NP_443075 Length = 6620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 2927 VEEKGTAV 2934>NP_001258152 Length = 8923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3356 VEEKGTAV 3363>NP_001092093 Length = 7968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 2927 VEEKGTAV 2934>NP_149438 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204>NP_001014765 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204>XP_005249383 Length = 3186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 IQEKSTA 8 IQ+KSTA Sbjct: 2404 IQKKSTA 2410>XP_006711892 Length = 6865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3172 VEEKGTAV 3179>XP_006711891 Length = 8925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3356 VEEKGTAV 3363>XP_006711890 Length = 6957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711889 Length = 7297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273367 Length = 7677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273366 Length = 7678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711888 Length = 8059 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711887 Length = 8499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273364 Length = 8653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273362 Length = 8675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273361 Length = 8763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711886 Length = 8833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711885 Length = 8835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273359 Length = 8843 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3080 VEEKGTAV 3087>XP_006711884 Length = 8847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273357 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273356 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273358 Length = 8851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273355 Length = 8924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273353 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3172 VEEKGTAV 3179>XP_005273352 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3172 VEEKGTAV 3179>XP_005273354 Length = 8935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3172 VEEKGTAV 3179>XP_005273349 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711883 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273350 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273351 Length = 8939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711882 Length = 8977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3214 VEEKGTAV 3221>XP_005273348 Length = 9015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273346 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273347 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273345 Length = 9026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_005273344 Length = 9027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IQEKSTAV 9 ++EK TAV Sbjct: 3264 VEEKGTAV 3271>XP_006711109 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204>XP_006711108 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204>XP_005263595 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204>XP_006711107 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TIQEKSTA 8 TIQ+KS A Sbjct: 197 TIQQKSDA 204Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.104 0.228 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,881 Number of extensions: 208 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |