Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 869 NP_055832 18 1935 NP_963920 18 1935 NP_963918 18 1935 XP_005270706 18 1935 XP_005270705 18 1935 NP_061984 17 4312 NP_002110 17 4312 NP_620140 17 4312 XP_006726149 17 4312 XP_005275597 17 4312 XP_006726059 17 4312 XP_005275440 17 4312 XP_006725969 17 4312 XP_005275300 17 4312 XP_006725878 17 4312 XP_005275163 17 4312 XP_006725760 17 4312 XP_005275008 17 4312 XP_006725546 17 4312 XP_005272861 17 4312 XP_006715139 17 4312 XP_005249104 17 4312 NP_001008563 16 5631 NP_006667 16 5631 NP_001103773 16 5631 NP_055860 16 5631 NP_001014763 16 5631 XP_006717792 16 5631 XP_006717791 16 5631 XP_006717790 16 5631 XP_006717789 16 5631 XP_006717001 16 5631 XP_005251722 16 5631 NP_060139 16 7355 NP_001139281 16 7355 NP_001070654 16 7355 NP_079005 16 7355 XP_006723449 16 7355 XP_006718900 16 7355 NP_115495 15 9605 NP_783200 15 9605 NP_075069 15 9605 NP_001193884 15 9605 NP_783302 15 9605 NP_001193885 15 9605 NP_001184167 15 9605 NP_003939 15 9605 NP_065923 15 9605 NP_001035514 15 9605 NP_001269863 15 9605 NP_071398 15 9605 XP_006724103 15 9605 XP_006724102 15 9605 XP_006722987 15 9605 XP_006718731 15 9605 XP_006718730 15 9605 XP_006714470 15 9605 XP_006714469 15 9605 XP_005263392 15 9605 XP_005264816 15 9605 XP_005264815 15 9605 XP_005264814 15 9605 XP_006713067 15 9605 XP_006713066 15 9605>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TINVTTLRN 9 TIN TTLRN Sbjct: 536 TINGTTLRN 544>NP_055832 Length = 942 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TINVTTLR 8 T+N+TTLR Sbjct: 104 TVNLTTLR 111>NP_963920 Length = 828 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TINVTTLR 8 T+N+TTLR Sbjct: 104 TVNLTTLR 111>NP_963918 Length = 911 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TINVTTLR 8 T+N+TTLR Sbjct: 73 TVNLTTLR 80>XP_005270706 Length = 851 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TINVTTLR 8 T+N+TTLR Sbjct: 104 TVNLTTLR 111>XP_005270705 Length = 934 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TINVTTLR 8 T+N+TTLR Sbjct: 104 TVNLTTLR 111>NP_061984 Length = 254 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 +NVT LRN Sbjct: 142 VNVTWLRN 149>NP_002110 Length = 250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>NP_620140 Length = 330 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 INVTTLRN 9 INVTTL++ Sbjct: 45 INVTTLKD 52>XP_006726149 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275597 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006726059 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275440 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725969 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275300 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725878 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275163 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725760 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005275008 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006725546 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005272861 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>XP_006715139 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 113 INITWLRN 120>XP_005249104 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+T LRN Sbjct: 143 INITWLRN 150>NP_001008563 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TINVTTLR 8 T+N+TT R Sbjct: 73 TVNLTTFR 80>NP_006667 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TINVTTLR 8 T+N+TT R Sbjct: 73 TVNLTTFR 80>NP_001103773 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TINVTTLR 8 T+N+TT R Sbjct: 73 TVNLTTFR 80>NP_055860 Length = 1190 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 INVTTLR 8 INVTT+R Sbjct: 1138 INVTTVR 1144>NP_001014763 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINVTTLRN 9 TIN LRN Sbjct: 8 TINTVNLRN 16>XP_006717792 Length = 1184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 INVTTLR 8 INVTT+R Sbjct: 1132 INVTTVR 1138>XP_006717791 Length = 1210 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 INVTTLR 8 INVTT+R Sbjct: 1158 INVTTVR 1164>XP_006717790 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 INVTTLR 8 INVTT+R Sbjct: 1203 INVTTVR 1209>XP_006717789 Length = 1261 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 INVTTLR 8 INVTT+R Sbjct: 1209 INVTTVR 1215>XP_006717001 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TINVTTLR 8 T+N+TT R Sbjct: 73 TVNLTTFR 80>XP_005251722 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TINVTTLR 8 T+N+TT R Sbjct: 73 TVNLTTFR 80>NP_060139 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 INVTTLRN 9 +NVTTL++ Sbjct: 794 VNVTTLQD 801>NP_001139281 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 VTTLRN Sbjct: 1979 VTTLRN 1984>NP_001070654 Length = 2003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 VTTLRN Sbjct: 1946 VTTLRN 1951>NP_079005 Length = 1995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 VTTLRN Sbjct: 1938 VTTLRN 1943>XP_006723449 Length = 2003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 VTTLRN Sbjct: 1946 VTTLRN 1951>XP_006718900 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TINVTTL 7 T+N+TTL Sbjct: 543 TVNLTTL 549>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 +N+T L+N Sbjct: 876 VNITILKN 883>NP_783200 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 891 TVNVTT 896>NP_075069 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 +TTLRN Sbjct: 147 ITTLRN 152>NP_001193884 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 891 TVNVTT 896>NP_783302 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 563 TVNVTT 568>NP_001193885 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 562 TVNVTT 567>NP_001184167 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 +N+T LRN Sbjct: 328 VNLTGLRN 335>NP_003939 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 INVTTL 7 INVTTL Sbjct: 467 INVTTL 472>NP_065923 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 893 TVNVTT 898>NP_001035514 Length = 1178 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+TTL N Sbjct: 1116 INLTTLVN 1123>NP_001269863 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+TTL N Sbjct: 1136 INLTTLVN 1143>NP_071398 Length = 1507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+TTL N Sbjct: 1445 INLTTLVN 1452>XP_006724103 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+TTL N Sbjct: 1072 INLTTLVN 1079>XP_006724102 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INVTTLRN 9 IN+TTL N Sbjct: 1092 INLTTLVN 1099>XP_006722987 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINVTTLRN 9 +IN+ LRN Sbjct: 329 SINIMNLRN 337>XP_006718731 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 +TTLRN Sbjct: 19 ITTLRN 24>XP_006718730 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VTTLRN 9 +TTLRN Sbjct: 32 ITTLRN 37>XP_006714470 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 INVTTL 7 INVTTL Sbjct: 467 INVTTL 472>XP_006714469 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 INVTTL 7 INVTTL Sbjct: 467 INVTTL 472>XP_005263392 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 INVTTL 7 INVTTL Sbjct: 467 INVTTL 472>XP_005264816 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 512 TVNVTT 517>XP_005264815 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 788 TVNVTT 793>XP_005264814 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 893 TVNVTT 898>XP_006713067 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 890 TVNVTT 895>XP_006713066 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TINVTT 6 T+NVTT Sbjct: 897 TVNVTT 902Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.125 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 292,340 Number of extensions: 355 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |