Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 20 390 XP_005267290 20 390 NP_689752 18 1135 NP_490647 17 3301 NP_001254489 17 3301 NP_055616 17 3301 NP_001254490 17 3301 XP_006722787 17 3301 XP_005259596 17 3301 XP_005249573 17 3301 XP_005249572 17 3301 XP_006711879 17 3301 XP_005273329 17 3301 NP_001195 17 4312 NP_006085 17 4312 NP_001157743 17 4312 NP_872584 17 4312 XP_005273432 17 4312 XP_005273431 17 4312 NP_008880 16 5631 NP_001258963 16 5631 NP_001120868 16 5631 NP_037477 16 5631 NP_001265623 16 5631 NP_001265625 16 5631 NP_001265624 16 5631 XP_006722914 16 5631 NP_009200 16 5631 NP_061183 16 7355 NP_112169 16 7355 NP_001078956 16 7355 XP_006711502 16 7355 XP_006711501 16 7355 XP_006711500 16 7355 XP_006710377 16 7355 NP_001159611 15 9605 NP_710153 15 9605 NP_078880 15 9605 NP_001139547 15 9605 NP_003156 15 9605 NP_001171628 15 9605 NP_062555 15 9605 XP_005254804 15 9605 XP_006720791 15 9605 XP_005254803 15 9605 XP_005254800 15 9605 XP_005254799 15 9605 XP_006712351 15 9605 XP_006712350 15 9605 NP_653233 15 9605 NP_001027392 15 9605 NP_003913 15 9605>NP_005091 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TINGVAEQN 9 TINGVAEQ+ Sbjct: 64 TINGVAEQD 72>XP_005267290 Length = 1782 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TINGVAEQN 9 TINGVAEQ+ Sbjct: 64 TINGVAEQD 72>NP_689752 Length = 536 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 NGVAEQN 9 NGVAEQN Sbjct: 73 NGVAEQN 79>NP_490647 Length = 326 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TINGVAEQN 9 TINGVA+ + Sbjct: 228 TINGVADDD 236>NP_001254489 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 INGV+ QN Sbjct: 240 INGVSSQN 247>NP_055616 Length = 2137 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 +NG AEQN Sbjct: 597 LNGSAEQN 604>NP_001254490 Length = 928 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 INGV+ QN Sbjct: 249 INGVSSQN 256>XP_006722787 Length = 919 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 INGV+ QN Sbjct: 240 INGVSSQN 247>XP_005259596 Length = 938 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 INGV+ QN Sbjct: 259 INGVSSQN 266>XP_005249573 Length = 334 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TINGVAEQN 9 TINGVA+ + Sbjct: 228 TINGVADDD 236>XP_005249572 Length = 334 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TINGVAEQN 9 TINGVA+ + Sbjct: 228 TINGVADDD 236>XP_006711879 Length = 1364 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 +NG AEQN Sbjct: 597 LNGSAEQN 604>XP_005273329 Length = 1934 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 +NG AEQN Sbjct: 394 LNGSAEQN 401>NP_001195 Length = 1038 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TINGVAEQN 9 T+NGVA +N Sbjct: 805 TMNGVAGRN 813>NP_006085 Length = 1091 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINGVAEQN 9 T N V EQN Sbjct: 349 TFNNVVEQN 357>NP_001157743 Length = 1017 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINGVAEQN 9 T N V EQN Sbjct: 275 TFNNVVEQN 283>NP_872584 Length = 1528 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINGVAEQN 9 T N V EQN Sbjct: 786 TFNNVVEQN 794>XP_005273432 Length = 1125 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINGVAEQN 9 T N V EQN Sbjct: 383 TFNNVVEQN 391>XP_005273431 Length = 1528 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TINGVAEQN 9 T N V EQN Sbjct: 786 TFNNVVEQN 794>NP_008880 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NGVAEQN 9 NGV+E+N Sbjct: 415 NGVSEEN 421>NP_001258963 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NGVAEQN 9 NGV+E+N Sbjct: 426 NGVSEEN 432>NP_001120868 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NGVAEQN 9 NGV+E+N Sbjct: 412 NGVSEEN 418>NP_037477 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TINGVAE 7 T+NGVA+ Sbjct: 298 TVNGVAD 304>NP_001265623 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TINGVAE 7 T+NGVA+ Sbjct: 298 TVNGVAD 304>NP_001265625 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TINGVAE 7 T+NGVA+ Sbjct: 110 TVNGVAD 116>NP_001265624 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TINGVAE 7 T+NGVA+ Sbjct: 289 TVNGVAD 295>XP_006722914 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NGVAEQN 9 NGV+E+N Sbjct: 388 NGVSEEN 394>NP_009200 Length = 592 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINGVAEQN 9 +ING E+N Sbjct: 414 SINGTTEEN 422>NP_061183 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INGVAEQN 9 +NG AE N Sbjct: 425 VNGCAEHN 432>NP_112169 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INGVAEQ 8 +NG+AEQ Sbjct: 231 LNGLAEQ 237>NP_001078956 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NGV E+N Sbjct: 815 NGVTEEN 821>XP_006711502 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INGVAEQN 9 +NG AE N Sbjct: 200 VNGCAEHN 207>XP_006711501 Length = 273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INGVAEQN 9 +NG AE N Sbjct: 213 VNGCAEHN 220>XP_006711500 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INGVAEQN 9 +NG AE N Sbjct: 312 VNGCAEHN 319>XP_006710377 Length = 827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NGV E+N Sbjct: 814 NGVTEEN 820>NP_001159611 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINGVAEQN 9 T+N + EQN Sbjct: 216 TVNRMQEQN 224>NP_710153 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINGVAEQN 9 T+N + EQN Sbjct: 216 TVNRMQEQN 224>NP_078880 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NGV E+N Sbjct: 46 NGVPEEN 52>NP_001139547 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NGV E+N Sbjct: 46 NGVPEEN 52>NP_003156 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NG+ E+N Sbjct: 416 NGITEEN 422>NP_001171628 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINGVAEQN 9 T NG +EQ+ Sbjct: 55 TANGTSEQH 63>NP_062555 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TINGVAEQN 9 T NG +EQ+ Sbjct: 55 TANGTSEQH 63>XP_005254804 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3252 LRGIAEEN 3259>XP_006720791 Length = 4853 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3309 LRGIAEEN 3316>XP_005254803 Length = 4854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3310 LRGIAEEN 3317>XP_005254800 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3317 LRGIAEEN 3324>XP_005254799 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3317 LRGIAEEN 3324>XP_006712351 Length = 113 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NG+ E+N Sbjct: 62 NGIVEEN 68>XP_006712350 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NG+ E+N Sbjct: 62 NGIVEEN 68>NP_653233 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NG+ E+N Sbjct: 62 NGIVEEN 68>NP_001027392 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 NGVAEQN 9 NG+ E+N Sbjct: 416 NGITEEN 422>NP_003913 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 INGVAEQN 9 + G+AE+N Sbjct: 3317 LRGIAEEN 3324Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.119 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 408,938 Number of extensions: 674 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |