Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 18 1135 NP_004561 18 1135 NP_001275703 18 1135 XP_005253450 18 1135 XP_006719151 18 1135 NP_001005191 16 5631 XP_005250166 16 7355 NP_660207 15 9605 NP_005637 15 9605 NP_444282 15 9605 NP_001005161 15 9605 NP_001171661 15 9605 NP_004245 15 9605 NP_001171665 15 9605 NP_001171662 15 9605 NP_056053 15 9605 NP_001273700 15 9605 NP_001183959 15 9605 NP_115593 15 9605 NP_078944 15 9605 NP_942592 15 9605 NP_060448 15 9605 NP_060217 15 9605 NP_065741 15 9605 NP_001155134 15 9605 NP_001155133 15 9605 XP_005273812 15 9605 XP_005269600 15 9605 XP_006714899 15 9605 XP_005265910 15 9605 XP_006714898 15 9605 XP_005265909 15 9605 XP_005265908 15 9605 XP_005265907 15 9605 XP_005265730 15 9605 XP_005265729 15 9605 XP_005265728 15 9605 XP_005265724 15 9605 XP_006711875 15 9605 XP_005273291 15 9605>NP_001275701 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILRRLTFS 9 TILRR TFS Sbjct: 752 TILRRWTFS 760>NP_004561 Length = 1445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILRRLTFS 9 TILRR TFS Sbjct: 711 TILRRWTFS 719>NP_001275703 Length = 1264 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILRRLTFS 9 TILRR TFS Sbjct: 530 TILRRWTFS 538>XP_005253450 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILRRLTFS 9 TILRR TFS Sbjct: 752 TILRRWTFS 760>XP_006719151 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILRRLTFS 9 TILRR TFS Sbjct: 752 TILRRWTFS 760>NP_001005191 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ILRRLTFS 9 +++RLTFS Sbjct: 162 LMKRLTFS 169>XP_005250166 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RRLTFS 9 RRLTFS Sbjct: 112 RRLTFS 117>NP_660207 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TIL +TFS Sbjct: 205 TILMAITFS 213>NP_005637 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 ILRRLT + Sbjct: 733 ILRRLTMN 740>NP_444282 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRRL+F Sbjct: 559 VLRRLSF 565>NP_001005161 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +L+RLTF Sbjct: 164 LLKRLTF 170>NP_001171661 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRR+TF Sbjct: 322 MLRRMTF 328>NP_004245 Length = 542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRR+TF Sbjct: 322 MLRRMTF 328>NP_001171665 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRR+TF Sbjct: 199 MLRRMTF 205>NP_001171662 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRR+TF Sbjct: 231 MLRRMTF 237>NP_056053 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 923 TIIRSKTFS 931>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 87 VLRRLTSS 94>NP_001183959 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 171 VLRRLTSS 178>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>NP_078944 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 171 VLRRLTSS 178>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>NP_060448 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 160 VLRRLTSS 167>NP_060217 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 171 VLRRLTSS 178>NP_065741 Length = 2617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 171 VLRRLTSS 178>NP_001155134 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 923 TIIRSKTFS 931>NP_001155133 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 923 TIIRSKTFS 931>XP_005273812 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILRRLTF 8 +LRRL+F Sbjct: 428 VLRRLSF 434>XP_005269600 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TIL +TFS Sbjct: 212 TILMAITFS 220>XP_006714899 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 685 TIIRSKTFS 693>XP_005265910 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 923 TIIRSKTFS 931>XP_006714898 Length = 1117 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 928 TIIRSKTFS 936>XP_005265909 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 928 TIIRSKTFS 936>XP_005265908 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 928 TIIRSKTFS 936>XP_005265907 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILRRLTFS 9 TI+R TFS Sbjct: 928 TIIRSKTFS 936>XP_005265730 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>XP_005265729 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 +LRRLT S Sbjct: 200 VLRRLTSS 207>XP_006711875 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 ILRRLT + Sbjct: 277 ILRRLTMN 284>XP_005273291 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILRRLTFS 9 ILRRLT + Sbjct: 732 ILRRLTMN 739Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.148 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,168 Number of extensions: 633 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |