Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 665 XP_006717989 19 665 NP_005415 18 1935 NP_001240286 18 1935 XP_006710932 18 1935 XP_005271220 18 1935 NP_001171886 17 3301 NP_115513 17 3301 NP_001171887 17 3301 XP_006713405 17 3301 XP_006713404 17 3301 NP_005520 17 4312 NP_065385 17 4312 XP_005245920 17 4312 XP_006710660 17 4312 XP_006710659 17 4312 XP_006710658 17 4312 XP_006710657 17 4312 NP_110437 16 5631 NP_001139021 16 5631 XP_005258332 16 5631 NP_005916 16 5631 NP_000811 16 7355 NP_001137417 16 7355 NP_001137418 16 7355 NP_001273675 16 7355 NP_116228 16 7355 NP_001273676 16 7355 NP_079084 16 7355 XP_006721609 16 7355 XP_006719931 16 7355 NP_036525 16 7355 NP_849151 16 7355 NP_055448 16 7355 NP_115497 15 9605 NP_055990 15 9605 NP_001193976 15 9605 NP_647537 15 9605 NP_647538 15 9605 NP_055553 15 9605 NP_005269 15 9605 NP_001001996 15 9605 NP_001001995 15 9605 NP_001001994 15 9605 XP_005274547 15 9605 XP_005274546 15 9605 XP_005260918 15 9605 XP_005260917 15 9605 XP_005257924 15 9605 XP_005257923 15 9605 XP_005257922 15 9605 XP_005257921 15 9605 XP_006722263 15 9605 XP_005257920 15 9605 XP_005253668 15 9605 XP_005253667 15 9605 XP_005253666 15 9605 XP_006716674 15 9605 XP_005265050 15 9605 XP_005265049 15 9605 XP_006713135 15 9605 NP_076417 15 9605>NP_000305 Length = 403 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILMFSGGT 9 TI MFSGGT Sbjct: 202 TIPMFSGGT 210>XP_006717989 Length = 388 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILMFSGGT 9 TI MFSGGT Sbjct: 187 TIPMFSGGT 195>NP_005415 Length = 1138 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 TIL FS GT Sbjct: 807 TILQFSSGT 815>NP_001240286 Length = 1093 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 TIL FS GT Sbjct: 762 TILQFSSGT 770>XP_006710932 Length = 783 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 TIL FS GT Sbjct: 452 TILQFSSGT 460>XP_005271220 Length = 1095 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 TIL FS GT Sbjct: 764 TILQFSSGT 772>NP_001171886 Length = 782 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 ILMF+GG Sbjct: 661 ILMFAGG 667>NP_115513 Length = 904 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 ILMF+GG Sbjct: 783 ILMFAGG 789>NP_001171887 Length = 782 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 ILMF+GG Sbjct: 661 ILMFAGG 667>XP_006713405 Length = 947 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 ILMF+GG Sbjct: 783 ILMFAGG 789>XP_006713404 Length = 947 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 ILMF+GG Sbjct: 783 ILMFAGG 789>NP_005520 Length = 4391 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 3965 VLLFSGG 3971>NP_065385 Length = 731 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 210 VLLFSGG 216>XP_005245920 Length = 4392 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 3966 VLLFSGG 3972>XP_006710660 Length = 4397 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 3971 VLLFSGG 3977>XP_006710659 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 4130 VLLFSGG 4136>XP_006710658 Length = 4563 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 4137 VLLFSGG 4143>XP_006710657 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+FSGG Sbjct: 4153 VLLFSGG 4159>NP_110437 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILMFSGG 8 T+L+F GG Sbjct: 398 TLLLFRGG 405>NP_001139021 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILMFSGG 8 T+L+F GG Sbjct: 290 TLLLFRGG 297>XP_005258332 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+ +FS GT Sbjct: 541 TVALFSNGT 549>NP_005916 Length = 701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+ +FS GT Sbjct: 541 TVALFSNGT 549>NP_000811 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 IL+F+GG Sbjct: 333 ILLFAGG 339>NP_001137417 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 IL+F+GG Sbjct: 60 ILLFAGG 66>NP_001137418 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 IL+F+GG Sbjct: 34 ILLFAGG 40>NP_001273675 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MFSGGT 9 M+SGGT Sbjct: 412 MYSGGT 417>NP_116228 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILMFSGGT 9 +L+FSG T Sbjct: 351 LLLFSGAT 358>NP_001273676 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MFSGGT 9 M+SGGT Sbjct: 267 MYSGGT 272>NP_079084 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MFSGGT 9 M+SGGT Sbjct: 397 MYSGGT 402>XP_006721609 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 +MFSGG Sbjct: 424 IMFSGG 429>XP_006719931 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MFSGGT 9 M+SGGT Sbjct: 286 MYSGGT 291>NP_036525 Length = 1338 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 +MFSGG Sbjct: 424 IMFSGG 429>NP_849151 Length = 147 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TILMFSGG 8 ++++FSGG Sbjct: 123 SVMVFSGG 130>NP_055448 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILMFSGGT 9 ILMF+G T Sbjct: 888 ILMFTGET 895>NP_115497 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 ILMFSGG 8 +L+F+GG Sbjct: 304 VLLFNGG 310>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 L+FSGG Sbjct: 2473 LLFSGG 2478>NP_001193976 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+L+F G T Sbjct: 449 TMLVFGGNT 457>NP_647537 Length = 1429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+L+F G T Sbjct: 565 TMLVFGGNT 573>NP_647538 Length = 1272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+L+F G T Sbjct: 565 TMLVFGGNT 573>NP_055553 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 431 TVLFFSG 437>NP_005269 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 41 TILCFSG 47>NP_001001996 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 81 TILCFSG 87>NP_001001995 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 81 TILCFSG 87>NP_001001994 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 22 TILCFSG 28>XP_005274547 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 22 TILCFSG 28>XP_005274546 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 TIL FSG Sbjct: 41 TILCFSG 47>XP_005260918 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+L+F G T Sbjct: 565 TMLVFGGNT 573>XP_005260917 Length = 1289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T+L+F G T Sbjct: 565 TMLVFGGNT 573>XP_005257924 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 163 TVLFFSG 169>XP_005257923 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 172 TVLFFSG 178>XP_005257922 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 441 TVLFFSG 447>XP_005257921 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 441 TVLFFSG 447>XP_006722263 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 431 TVLFFSG 437>XP_005257920 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TILMFSG 7 T+L FSG Sbjct: 431 TVLFFSG 437>XP_005253668 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMFSGGT 9 +MFS GT Sbjct: 287 IMFSSGT 293>XP_005253667 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMFSGGT 9 +MFS GT Sbjct: 287 IMFSSGT 293>XP_005253666 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMFSGGT 9 +MFS GT Sbjct: 287 IMFSSGT 293>XP_006716674 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILMFSGGT 9 T L+F GG+ Sbjct: 823 TALVFGGGS 831>XP_005265050 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 L+FSGG Sbjct: 1297 LLFSGG 1302>XP_005265049 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 L+FSGG Sbjct: 2439 LLFSGG 2444>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LMFSGG 8 L+FSGG Sbjct: 2446 LLFSGG 2451>NP_076417 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LMFSGGT 9 +MFS GT Sbjct: 287 IMFSSGT 293Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.143 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 664,409 Number of extensions: 873 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |