Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_570711 18 1935 NP_570712 18 1935 NP_570714 18 1935 NP_570713 18 1935 NP_570716 18 1935 NP_000235 18 1935 NP_570715 18 1935 XP_006718620 18 1935 XP_005274059 18 1935 XP_005274060 18 1935 XP_005274058 18 1935 NP_056327 17 4312 XP_006713163 17 4312 NP_569118 16 5631 NP_932065 16 5631 NP_932064 16 5631 XP_005254562 16 5631 XP_006720650 16 5631 XP_005254559 16 5631 XP_006720649 16 5631 XP_005254557 16 5631 XP_006713938 16 5631 NP_060213 16 5631 NP_001326 16 7355 NP_006633 15 9605 NP_002147 15 9605 NP_955472 15 9605 NP_599152 15 9605 NP_443166 15 9605 NP_061923 15 9605 XP_006725036 15 9605 XP_006725035 15 9605 XP_006725031 15 9605 XP_006725030 15 9605 XP_006725027 15 9605 XP_005263134 15 9605 XP_006714303 15 9605 XP_005263133 15 9605 XP_005263132 15 9605 XP_005263131 15 9605 XP_005263130 15 9605 XP_005246575 15 9605 XP_005273080 15 9605 XP_006711793 15 9605 XP_005273073 15 9605 XP_006711792 15 9605 XP_006711790 15 9605 XP_006711207 15 9605>NP_570711 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 150 TKLDSSGVA 158>NP_570712 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>NP_570714 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>NP_570713 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>NP_570716 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>NP_000235 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>NP_570715 Length = 615 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 155 TKLDSSGVA 163>XP_006718620 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 150 TKLDSSGVA 158>XP_005274059 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 150 TKLDSSGVA 158>XP_005274060 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 150 TKLDSSGVA 158>XP_005274058 Length = 610 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T LDSSGVA Sbjct: 150 TKLDSSGVA 158>NP_056327 Length = 4265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILDSSGV 8 +LDSSGV Sbjct: 664 VLDSSGV 670>XP_006713163 Length = 4265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ILDSSGV 8 +LDSSGV Sbjct: 664 VLDSSGV 670>NP_569118 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 603 TILDSAG 609>NP_932065 Length = 847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 619 TILDSAG 625>NP_932064 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 619 TILDSAG 625>XP_005254562 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 200 TILDSAG 206>XP_006720650 Length = 729 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 619 TILDSAG 625>XP_005254559 Length = 829 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 619 TILDSAG 625>XP_006720649 Length = 855 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 576 TILDSAG 582>XP_005254557 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 619 TILDSAG 625>XP_006713938 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILDSSGVA 9 T+LD SGV+ Sbjct: 41 TLLDVSGVS 49>NP_060213 Length = 782 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 TILDS+G Sbjct: 603 TILDSAG 609>NP_001326 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TILDSSGVA 9 T+L++SG+A Sbjct: 202 TVLNNSGLA 210>NP_006633 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 177 TLLDASG 183>NP_002147 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ILDSSGVA 9 +LD++GVA Sbjct: 529 LLDAAGVA 536>NP_955472 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ILDSSGVA 9 +LD++GVA Sbjct: 529 LLDAAGVA 536>NP_599152 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILDSSGVA 9 ILD SGV+ Sbjct: 666 ILDMSGVS 673>NP_443166 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILDSSGVA 9 ILD SGV+ Sbjct: 666 ILDMSGVS 673>NP_061923 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 711 TVMDISGV 718>XP_006725036 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 177 TLLDASG 183>XP_006725035 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_006725031 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 79 TLLDASG 85>XP_006725030 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_006725027 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_005263134 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 711 TVMDISGV 718>XP_006714303 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 595 TVMDISGV 602>XP_005263133 Length = 1022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 660 TVMDISGV 667>XP_005263132 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 661 TVMDISGV 668>XP_005263131 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 711 TVMDISGV 718>XP_005263130 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILDSSGV 8 T++D SGV Sbjct: 711 TVMDISGV 718>XP_005246575 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ILDSSGVA 9 +LD++GVA Sbjct: 529 LLDAAGVA 536>XP_005273080 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 177 TLLDASG 183>XP_006711793 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_005273073 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 79 TLLDASG 85>XP_006711792 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_006711790 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TILDSSG 7 T+LD+SG Sbjct: 187 TLLDASG 193>XP_006711207 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILDSSGVA 9 ILD SGV+ Sbjct: 666 ILDMSGVS 673Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.124 0.306 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 531,231 Number of extensions: 778 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |