Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_115984 17 4312 NP_001034795 17 4312 NP_001153610 17 4312 XP_006716194 17 4312 XP_005250657 17 4312 XP_005250656 17 4312 XP_006716193 17 4312 XP_006716192 17 4312 XP_005250655 17 4312 XP_005250654 17 4312 XP_005250653 17 4312 NP_001229725 16 5631 NP_001229724 16 5631 NP_055484 16 5631 XP_005256320 16 5631 NP_001274370 16 7355 NP_955352 16 7355 NP_079176 16 7355 NP_001274371 16 7355 NP_001274368 16 7355 NP_001274372 16 7355 NP_001274366 16 7355 NP_001274369 16 7355 NP_000740 16 7355 NP_001273336 16 7355 NP_689473 16 7355 XP_005263289 16 7355 XP_006714373 16 7355 XP_005263286 16 7355 NP_006693 15 9605 NP_001159583 15 9605 NP_001159585 15 9605 NP_001159586 15 9605 NP_001159584 15 9605 NP_005112 15 9605 NP_077014 15 9605 NP_003250 15 9605 XP_005262372 15 9605 XP_005262371 15 9605 XP_005255628 15 9605 XP_005255627 15 9605 NP_001013716 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILAQNEDA 9 TI+AQNEDA Sbjct: 393 TIVAQNEDA 401>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILAQNEDA 9 TI+AQNEDA Sbjct: 418 TIVAQNEDA 426>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILAQNEDA 9 TI+AQNEDA Sbjct: 393 TIVAQNEDA 401>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILAQNEDA 9 TI+AQNEDA Sbjct: 415 TIVAQNEDA 423>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TILAQNEDA 9 TI+AQNEDA Sbjct: 418 TIVAQNEDA 426>NP_115984 Length = 817 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAQNEDA 9 LA+NEDA Sbjct: 650 LAENEDA 656>NP_001034795 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>NP_001153610 Length = 923 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 299 TIIAQNPEA 307>XP_006716194 Length = 553 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>XP_005250657 Length = 553 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>XP_005250656 Length = 636 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>XP_006716193 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 128 TIIAQNPEA 136>XP_006716192 Length = 794 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 170 TIIAQNPEA 178>XP_005250655 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>XP_005250654 Length = 895 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>XP_005250653 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TILAQNEDA 9 TI+AQN +A Sbjct: 317 TIIAQNPEA 325>NP_001229725 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILAQNEDA 9 T+LA EDA Sbjct: 24 TLLASGEDA 32>NP_001229724 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILAQNEDA 9 T+LA EDA Sbjct: 24 TLLASGEDA 32>NP_055484 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILAQNEDA 9 T+LA EDA Sbjct: 147 TLLASGEDA 155>XP_005256320 Length = 819 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TILAQNEDA 9 T+LA EDA Sbjct: 147 TLLASGEDA 155>NP_001274370 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_955352 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_079176 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_001274371 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_001274368 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_001274372 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_001274366 Length = 830 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 339 TILAENDE 346>NP_001274369 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>NP_000740 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAQNEDA 9 +A+NEDA Sbjct: 25 IAENEDA 31>NP_001273336 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILAQNED 8 +LA+NED Sbjct: 164 LLAENED 170>NP_689473 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ILAQNED 8 +LA+NED Sbjct: 225 LLAENED 231>XP_005263289 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 351 TILAENDE 358>XP_006714373 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 366 TILAENDE 373>XP_005263286 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 TILA+N++ Sbjct: 378 TILAENDE 385>NP_006693 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAQNEDA 9 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159583 Length = 1375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAQNEDA 9 LAQ EDA Sbjct: 842 LAQQEDA 848>NP_001159585 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAQNEDA 9 LAQ EDA Sbjct: 794 LAQQEDA 800>NP_001159586 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAQNEDA 9 LAQ EDA Sbjct: 832 LAQQEDA 838>NP_001159584 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LAQNEDA 9 LAQ EDA Sbjct: 767 LAQQEDA 773>NP_005112 Length = 2174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TILAQNEDA 9 T+L+ EDA Sbjct: 736 TVLSHEEDA 744>NP_077014 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILAQNED 8 ILAQ ED Sbjct: 148 ILAQEED 154>NP_003250 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TILAQNED 8 T+LA+ ED Sbjct: 184 TVLARRED 191>XP_005262372 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAQNEDA 9 L+QNED+ Sbjct: 21 LSQNEDS 27>XP_005262371 Length = 1107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAQNEDA 9 L+QNED+ Sbjct: 101 LSQNEDS 107>XP_005255628 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILAQNED 8 ILAQ ED Sbjct: 148 ILAQEED 154>XP_005255627 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ILAQNED 8 ILAQ ED Sbjct: 148 ILAQEED 154>NP_001013716 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TILAQNED 8 T+L++NE+ Sbjct: 197 TVLSENEE 204Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.118 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 573,557 Number of extensions: 944 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |