Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 17 3301 NP_001263689 17 3301 NP_001119584 17 3301 NP_001119586 17 3301 NP_001263625 17 3301 NP_001119590 17 3301 NP_001263690 17 3301 NP_001119585 17 3301 NP_001263624 17 3301 NP_001119588 17 3301 NP_001119587 17 3301 NP_001119589 17 3301 NP_001263627 17 3301 NP_001263628 17 3301 NP_001263626 17 3301 NP_001138397 17 4312 NP_001269849 17 4312 NP_001171517 17 4312 NP_002453 17 4312 XP_005261039 17 4312 XP_005261038 17 4312 XP_005261037 17 4312 XP_005261036 17 4312 XP_005261035 17 4312 XP_006724068 17 4312 NP_001073005 16 7355 NP_004952 16 7355 NP_803235 16 7355 NP_060132 15 9605 NP_001170781 15 9605 NP_001170782 15 9605>NP_000537 Length = 393 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 253 TIITLEDSS 261>NP_001263689 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 214 TIITLEDSS 222>NP_001119584 Length = 393 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 253 TIITLEDSS 261>NP_001119586 Length = 341 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 253 TIITLEDSS 261>NP_001263625 Length = 302 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 214 TIITLEDSS 222>NP_001119590 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 214 TIITLEDSS 222>NP_001263690 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 214 TIITLEDSS 222>NP_001119585 Length = 346 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 253 TIITLEDSS 261>NP_001263624 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 214 TIITLEDSS 222>NP_001119588 Length = 209 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 121 TIITLEDSS 129>NP_001119587 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 121 TIITLEDSS 129>NP_001119589 Length = 214 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 121 TIITLEDSS 129>NP_001263627 Length = 182 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 94 TIITLEDSS 102>NP_001263628 Length = 187 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 94 TIITLEDSS 102>NP_001263626 Length = 234 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 TIITLE SS Sbjct: 94 TIITLEDSS 102>NP_001138397 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>NP_001269849 Length = 508 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>NP_001171517 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>NP_002453 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_005261039 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_005261038 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_005261037 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_005261036 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_005261035 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 161 LITLEISS 168>XP_006724068 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IITLEVSS 9 +ITLE+SS Sbjct: 184 LITLEISS 191>NP_001073005 Length = 158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 +I+T EVSS Sbjct: 137 SIVTAEVSS 145>NP_004952 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TIITLEVS 8 T++T+E+S Sbjct: 95 TVVTVEIS 102>NP_803235 Length = 130 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TIITLEVSS 9 +I+T EVSS Sbjct: 109 SIVTAEVSS 117>NP_060132 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TIITLEVSS 9 TI+TLE S Sbjct: 756 TILTLEFKS 764>NP_001170781 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TIITLEVSS 9 TI+TLE S Sbjct: 751 TILTLEFKS 759>NP_001170782 Length = 2017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TIITLEVSS 9 TI+TLE S Sbjct: 751 TILTLEFKS 759Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,509 Number of extensions: 366 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |