Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001185761                                                           20     299
NP_001185763                                                           20     299
NP_055459                                                              20     299
XP_006726436                                                           20     299
XP_006726410                                                           20     299
XP_006711784                                                           20     299
XP_006711719                                                           20     299
XP_006711718                                                           20     299
XP_006711717                                                           20     299
XP_006711716                                                           20     299
XP_006711715                                                           20     299
XP_006711714                                                           20     299
XP_006711713                                                           20     299
XP_006711712                                                           20     299
XP_006711711                                                           20     299
XP_006711710                                                           20     299
XP_006711709                                                           20     299
XP_005277503                                                           20     299
XP_005273038                                                           20     299
XP_006711708                                                           20     299
XP_005277500                                                           20     299
XP_006711707                                                           20     299
XP_005277499                                                           20     299
XP_006711706                                                           20     299
XP_006711705                                                           20     299
XP_006711164                                                           20     299
XP_005276114                                                           20     299
XP_006710122                                                           20     299
NP_689974                                                              17    2528
NP_001163045                                                           17    2528
NP_005754                                                              17    3301
XP_006721061                                                           17    3301
XP_006710064                                                           17    3301
NP_005895                                                              17    4312
NP_001177750                                                           17    4312
NP_001186713                                                           17    4312
NP_536737                                                              17    4312
NP_056500                                                              17    4312
NP_054766                                                              17    4312
NP_060719                                                              16    5631
NP_001258968                                                           16    5631
NP_001011649                                                           16    5631
NP_001139182                                                           16    5631
NP_001278257                                                           16    5631
NP_003156                                                              16    5631
XP_006717248                                                           16    5631
XP_006717247                                                           16    5631
XP_006717246                                                           16    5631
XP_006717245                                                           16    5631
XP_006717244                                                           16    5631
XP_006717243                                                           16    5631
XP_006717242                                                           16    5631
NP_777638                                                              16    5631
NP_001027392                                                           16    5631
NP_005326                                                              16    7355
NP_001017995                                                           16    7355
NP_203124                                                              16    7355
NP_001218                                                              16    7355
NP_203125                                                              16    7355
NP_055685                                                              16    7355
NP_006458                                                              16    7355
NP_203126                                                              16    7355
NP_001253987                                                           16    7355
NP_001253985                                                           16    7355
NP_060024                                                              16    7355
NP_060631                                                              16    7355
NP_001253986                                                           16    7355
XP_006718082                                                           16    7355
XP_006718081                                                           16    7355
XP_006718080                                                           16    7355
XP_006718079                                                           16    7355
XP_006714583                                                           16    7355
XP_006714582                                                           16    7355
XP_005248461                                                           16    7355
XP_005247602                                                           16    7355
NP_001077090                                                           16    7355
NP_037368                                                              15    9605
NP_002379                                                              15    9605
NP_001257401                                                           15    9605
NP_872407                                                              15    9605
NP_115583                                                              15    9605
NP_001275763                                                           15    9605
NP_001171655                                                           15    9605
NP_000346                                                              15    9605
NP_001001668                                                           15    9605
XP_005258968                                                           15    9605
XP_005258967                                                           15    9605
XP_006723273                                                           15    9605
XP_006722984                                                           15    9605
XP_006722983                                                           15    9605
>NP_001185761
          Length = 2240

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2215 THDVLKKA 2222
>NP_001185763
          Length = 2362

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2321 THDVLKKA 2328
>NP_055459
          Length = 2346

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2321 THDVLKKA 2328
>XP_006726436
          Length = 178

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   THDVLKKA 8
           THDVLKKA
Sbjct: 99  THDVLKKA 106
>XP_006726410
          Length = 2087

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2062 THDVLKKA 2069
>XP_006711784
          Length = 178

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   THDVLKKA 8
           THDVLKKA
Sbjct: 99  THDVLKKA 106
>XP_006711719
          Length = 2302

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2277 THDVLKKA 2284
>XP_006711718
          Length = 1436

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 1328 THDVLKKA 1335
>XP_006711717
          Length = 2385

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2277 THDVLKKA 2284
>XP_006711716
          Length = 2411

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2386 THDVLKKA 2393
>XP_006711715
          Length = 2428

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2320 THDVLKKA 2327
>XP_006711714
          Length = 2429

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2321 THDVLKKA 2328
>XP_006711713
          Length = 2432

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2324 THDVLKKA 2331
>XP_006711712
          Length = 2473

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2365 THDVLKKA 2372
>XP_006711711
          Length = 2482

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2374 THDVLKKA 2381
>XP_006711710
          Length = 2494

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2386 THDVLKKA 2393
>XP_006711709
          Length = 2495

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2387 THDVLKKA 2394
>XP_005277503
          Length = 2498

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2484 THDVLKKA 2491
>XP_005273038
          Length = 2509

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2484 THDVLKKA 2491
>XP_006711708
          Length = 2512

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2404 THDVLKKA 2411
>XP_005277500
          Length = 2525

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2484 THDVLKKA 2491
>XP_006711707
          Length = 2553

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2445 THDVLKKA 2452
>XP_005277499
          Length = 2561

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2484 THDVLKKA 2491
>XP_006711706
          Length = 2591

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2483 THDVLKKA 2490
>XP_006711705
          Length = 2592

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2484 THDVLKKA 2491
>XP_006711164
          Length = 2087

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    THDVLKKA 8
            THDVLKKA
Sbjct: 2062 THDVLKKA 2069
>XP_005276114
          Length = 134

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1  THDVLKKA 8
          THDVLKKA
Sbjct: 69 THDVLKKA 76
>XP_006710122
          Length = 126

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   THDVLKKA 8
           THDVLKKA
Sbjct: 99  THDVLKKA 106
>NP_689974
          Length = 332

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  THDVLKKAS 9
          TH++LKK +
Sbjct: 77 THEILKKVA 85
>NP_001163045
          Length = 330

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  THDVLKKAS 9
          TH++LKK +
Sbjct: 77 THEILKKVA 85
>NP_005754
          Length = 926

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   HDVLKKA 8
           HDVLK+A
Sbjct: 776 HDVLKEA 782
>XP_006721061
          Length = 688

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   THDVLKKA 8
           THD LK+A
Sbjct: 279 THDPLKRA 286
>XP_006710064
          Length = 688

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   THDVLKKA 8
           THD LK+A
Sbjct: 279 THDPLKRA 286
>NP_005895
          Length = 426

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH VLKK
Sbjct: 96  THSVLKK 102
>NP_001177750
          Length = 425

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH VLKK
Sbjct: 96  THSVLKK 102
>NP_001186713
          Length = 292

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   HDVLKKAS 9
           H V+KKAS
Sbjct: 169 HQVVKKAS 176
>NP_536737
          Length = 292

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   HDVLKKAS 9
           H V+KKAS
Sbjct: 169 HQVVKKAS 176
>NP_056500
          Length = 207

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  HDVLKKAS 9
          H V+KKAS
Sbjct: 84 HQVVKKAS 91
>NP_054766
          Length = 99

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  HDVLKKAS 9
          HDV+ KAS
Sbjct: 63 HDVVMKAS 70
>NP_060719
          Length = 1893

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1863 THKILRKA 1870
>NP_001258968
          Length = 1663

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1633 THKILRKA 1640
>NP_001011649
          Length = 1814

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1784 THKILRKA 1791
>NP_001139182
          Length = 324

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   HDVLKKA 8
           HD LKKA
Sbjct: 154 HDPLKKA 160
>NP_001278257
          Length = 187

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2  HDVLKKA 8
          HD LKKA
Sbjct: 17 HDPLKKA 23
>NP_003156
          Length = 603

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  HDVLKK 7
          HDV+KK
Sbjct: 16 HDVIKK 21
>XP_006717248
          Length = 1664

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1634 THKILRKA 1641
>XP_006717247
          Length = 1670

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1634 THKILRKA 1641
>XP_006717246
          Length = 1820

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1784 THKILRKA 1791
>XP_006717245
          Length = 1861

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1831 THKILRKA 1838
>XP_006717244
          Length = 1867

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1831 THKILRKA 1838
>XP_006717243
          Length = 1889

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1853 THKILRKA 1860
>XP_006717242
          Length = 1898

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    THDVLKKA 8
            TH +L+KA
Sbjct: 1862 THKILRKA 1869
>NP_777638
          Length = 587

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   THDVLKKAS 9
           T D+LK AS
Sbjct: 192 TQDILKHAS 200
>NP_001027392
          Length = 594

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  HDVLKK 7
          HDV+KK
Sbjct: 16 HDVIKK 21
>NP_005326
          Length = 486

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  HDVLKK 7
          HDVL+K
Sbjct: 65 HDVLRK 70
>NP_001017995
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           DVL+KAS
Sbjct: 493 DVLRKAS 499
>NP_203124
          Length = 336

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 154 DLLKKAS 160
>NP_001218
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 121 DLLKKAS 127
>NP_203125
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 121 DLLKKAS 127
>NP_055685
          Length = 1239

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 258 TQDVLKK 264
>NP_006458
          Length = 223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 138 TEDVLKK 144
>NP_203126
          Length = 253

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 121 DLLKKAS 127
>NP_001253987
          Length = 278

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 96  DLLKKAS 102
>NP_001253985
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 121 DLLKKAS 127
>NP_060024
          Length = 1801

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   THDVLKK 7
           TH++LKK
Sbjct: 618 THNLLKK 624
>NP_060631
          Length = 706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   THDVLKKAS 9
           +H VL+KA+
Sbjct: 202 SHQVLRKAN 210
>NP_001253986
          Length = 388

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 206 DLLKKAS 212
>XP_006718082
          Length = 311

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 129 DLLKKAS 135
>XP_006718081
          Length = 311

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 129 DLLKKAS 135
>XP_006718080
          Length = 317

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 135 DLLKKAS 141
>XP_006718079
          Length = 322

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   DVLKKAS 9
           D+LKKAS
Sbjct: 140 DLLKKAS 146
>XP_006714583
          Length = 223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 138 TEDVLKK 144
>XP_006714582
          Length = 223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 138 TEDVLKK 144
>XP_005248461
          Length = 223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 138 TEDVLKK 144
>XP_005247602
          Length = 1665

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   THDVLKK 7
           TH++LKK
Sbjct: 482 THNLLKK 488
>NP_001077090
          Length = 1239

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           T DVLKK
Sbjct: 258 TQDVLKK 264
>NP_037368
          Length = 475

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  DVLKKAS 9
          D+LKK+S
Sbjct: 52 DILKKSS 58
>NP_002379
          Length = 853

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HDVLKKA 8
           HD +KKA
Sbjct: 355 HDYVKKA 361
>NP_001257401
          Length = 818

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HDVLKKA 8
           HD +KKA
Sbjct: 320 HDYVKKA 326
>NP_872407
          Length = 465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   HDVLKKA 8
           HDV K+A
Sbjct: 420 HDVAKRA 426
>NP_115583
          Length = 657

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HDVLKK 7
           HDVLK+
Sbjct: 591 HDVLKQ 596
>NP_001275763
          Length = 625

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HDVLKK 7
           HDVLK+
Sbjct: 559 HDVLKQ 564
>NP_001171655
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   DVLKKA 8
           DVLKKA
Sbjct: 330 DVLKKA 335
>NP_000346
          Length = 427

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   DVLKKA 8
           DVLKKA
Sbjct: 357 DVLKKA 362
>NP_001001668
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH V+KK
Sbjct: 211 THSVVKK 217
>XP_005258968
          Length = 624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH V+KK
Sbjct: 211 THSVVKK 217
>XP_005258967
          Length = 666

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH V+KK
Sbjct: 160 THSVVKK 166
>XP_006723273
          Length = 717

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   THDVLKK 7
           TH V+KK
Sbjct: 211 THSVVKK 217
>XP_006722984
          Length = 303

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HDVLKK 7
           HDVLK+
Sbjct: 237 HDVLKQ 242
>XP_006722983
          Length = 625

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   HDVLKK 7
           HDVLK+
Sbjct: 559 HDVLKQ 564
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.307    0.117    0.307 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 487,028
Number of extensions: 674
Number of successful extensions: 90
Number of sequences better than 10000.0: 90
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 90
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package