Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 19 869 XP_006717990 19 869 XP_006717989 19 869 NP_055826 17 3301 NP_001185879 17 3301 NP_078863 17 4312 XP_005271253 17 4312 XP_005271252 17 4312 XP_005271251 17 4312 NP_689635 16 5631 NP_001240759 16 5631 NP_818931 16 5631 NP_001240758 16 5631 NP_000444 16 5631 NP_666018 16 5631 NP_036565 16 5631 NP_848593 16 5631 XP_006718220 16 5631 XP_006718219 16 5631 XP_006718218 16 5631 XP_006717021 16 5631 XP_005251769 16 5631 XP_006717020 16 5631 XP_005251768 16 5631 XP_005246485 16 5631 NP_001074295 16 7355 NP_079052 16 7355 NP_877950 16 7355 NP_689616 16 7355 NP_001192230 16 7355 NP_001191006 16 7355 NP_004779 16 7355 XP_005254732 16 7355 XP_005254731 16 7355 XP_006720754 16 7355 XP_005254729 16 7355 XP_005254730 16 7355 XP_005254728 16 7355 XP_005254727 16 7355 XP_005272427 16 7355 XP_005272426 16 7355 XP_006714503 16 7355 NP_001005199 16 7355 NP_001005201 16 7355 NP_001001914 16 7355 NP_001165881 15 9605 NP_001165828 15 9605 NP_001416 15 9605 NP_003009 15 9605 NP_006242 15 9605 NP_996790 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_954868 15 9605 NP_620598 15 9605 NP_620599 15 9605 NP_004348 15 9605 NP_954869 15 9605 NP_001034579 15 9605 NP_001277153 15 9605 NP_954870 15 9605 NP_004781 15 9605 NP_695008 15 9605 NP_695010 15 9605 NP_695009 15 9605 NP_937822 15 9605 NP_009158 15 9605 XP_006716443 15 9605 XP_006716442 15 9605 XP_005273655 15 9605 XP_006714544 15 9605>NP_000305 Length = 403 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 TGVMI AYL Sbjct: 131 TGVMICAYL 139>XP_006717990 Length = 175 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 TGVMI AYL Sbjct: 116 TGVMICAYL 124>XP_006717989 Length = 388 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 TGVMI AYL Sbjct: 116 TGVMICAYL 124>NP_055826 Length = 1858 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGVMIYAYL 9 TG IY YL Sbjct: 569 TGARIYTYL 577>NP_001185879 Length = 1880 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGVMIYAYL 9 TG IY YL Sbjct: 591 TGARIYTYL 599>NP_078863 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GVM+Y Y+ Sbjct: 116 GVMLYRYV 123>XP_005271253 Length = 204 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GVM+Y Y+ Sbjct: 43 GVMLYRYV 50>XP_005271252 Length = 246 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GVM+Y Y+ Sbjct: 85 GVMLYRYV 92>XP_005271251 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GVM+Y Y+ Sbjct: 86 GVMLYRYV 93>NP_689635 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 249 TGVLIACYL 257>NP_001240759 Length = 749 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 197 TGVLIACYL 205>NP_818931 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 197 TGVLIACYL 205>NP_001240758 Length = 808 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 251 TGVLIACYL 259>NP_000444 Length = 643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TG++IYA Sbjct: 145 TGIVIYA 151>NP_666018 Length = 610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TG++IYA Sbjct: 143 TGIVIYA 149>NP_036565 Length = 1304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GV++Y YL Sbjct: 975 GVVLYEYL 982>NP_848593 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718220 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718219 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TGV++YA Sbjct: 139 TGVVVYA 145>XP_006718218 Length = 507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TGV++YA Sbjct: 28 TGVVVYA 34>XP_006717021 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 73 TGVLIACYL 81>XP_005251769 Length = 703 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 146 TGVLIACYL 154>XP_006717020 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 197 TGVLIACYL 205>XP_005251768 Length = 754 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TGV+I YL Sbjct: 197 TGVLIACYL 205>XP_005246485 Length = 1158 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GV++Y YL Sbjct: 829 GVVLYEYL 836>NP_001074295 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1257 TGILIYELL 1265>NP_079052 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>NP_877950 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GVMIYAY 8 GV++Y+Y Sbjct: 414 GVLLYSY 420>NP_689616 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GVMIYAY 8 GV++Y+Y Sbjct: 648 GVLLYSY 654>NP_001192230 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GVMIYAY 8 GV++Y+Y Sbjct: 648 GVLLYSY 654>NP_001191006 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VMIYAYL 9 +++YAYL Sbjct: 288 ILLYAYL 294>NP_004779 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VMIYAYL 9 +++YAYL Sbjct: 295 ILLYAYL 301>XP_005254732 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005254731 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_006720754 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005254729 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005254730 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005254728 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005254727 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1595 TGILIYEML 1603>XP_005272427 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1257 TGILIYELL 1265>XP_005272426 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG++IY L Sbjct: 1257 TGILIYELL 1265>XP_006714503 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 GVMIYAY 8 GV++Y+Y Sbjct: 648 GVLLYSY 654>NP_001005199 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G MI+ YL Sbjct: 252 GTMIFTYL 259>NP_001005201 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G MI+ YL Sbjct: 253 GTMIFTYL 260>NP_001001914 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G +IY YL Sbjct: 253 GTIIYVYL 260>NP_001165881 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_001165828 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_001416 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGVMIYA 7 TG +IYA Sbjct: 113 TGALIYA 119>NP_003009 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 99 TGLVVYDY 106>NP_006242 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 +GV++YA L Sbjct: 211 SGVILYALL 219>NP_996790 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 +GV++YA L Sbjct: 226 SGVILYALL 234>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGVMIYAY 8 TGV Y+Y Sbjct: 2047 TGVQSYSY 2054>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGVMIYAY 8 TGV Y+Y Sbjct: 2047 TGVQSYSY 2054>NP_954868 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG M+ A+L Sbjct: 327 TGTMVCAFL 335>NP_620598 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GVMIYAY 8 G++ YAY Sbjct: 108 GILAYAY 114>NP_620599 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GVMIYAY 8 G++ YAY Sbjct: 108 GILAYAY 114>NP_004348 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GVMIYAY 8 G++ YAY Sbjct: 108 GILAYAY 114>NP_954869 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG M+ A+L Sbjct: 307 TGTMVCAFL 315>NP_001034579 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 GVMIYAY 8 G++ YAY Sbjct: 108 GILAYAY 114>NP_001277153 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG M+ A+L Sbjct: 207 TGTMVCAFL 215>NP_954870 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGVMIYAYL 9 TG M+ A+L Sbjct: 345 TGTMVCAFL 353>NP_004781 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G M++ YL Sbjct: 148 GAMVFGYL 155>NP_695008 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G M++ YL Sbjct: 148 GAMVFGYL 155>NP_695010 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G M++ YL Sbjct: 148 GAMVFGYL 155>NP_695009 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 GVMIYAYL 9 G M++ YL Sbjct: 148 GAMVFGYL 155>NP_937822 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGVMIYA 7 TGV+I+A Sbjct: 51 TGVLIFA 57>NP_009158 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GVMIYAYL 9 GVM+ AY+ Sbjct: 209 GVMLCAYM 216>XP_006716443 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 99 TGLVVYDY 106>XP_006716442 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 99 TGLVVYDY 106>XP_005273655 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TGVMIYAY 8 TG+++Y Y Sbjct: 148 TGLVVYDY 155>XP_006714544 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGVMIYAYL 9 +GV++YA L Sbjct: 110 SGVILYALL 118Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.148 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,900 Number of extensions: 681 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |