Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 19 665 NP_001161879 18 1935 NP_055804 18 1935 XP_006715455 18 1935 XP_006715452 18 1935 XP_006715451 18 1935 XP_006715450 18 1935 XP_005248745 18 1935 XP_005248744 18 1935 XP_005248743 18 1935 XP_005248742 18 1935 XP_006715449 18 1935 XP_006715448 18 1935 XP_006715447 18 1935 XP_006715446 18 1935 NP_001009811 17 4312 NP_055799 17 4312 XP_005257233 17 4312 XP_005257231 17 4312 NP_116218 16 5631 XP_006719717 16 5631 XP_005254027 16 5631 XP_006710433 16 5631 XP_006710432 16 5631 XP_006710431 16 5631 XP_006710430 16 5631 XP_006710429 16 5631 NP_005367 16 7355 NP_004970 16 7355 NP_699188 16 7355 NP_689870 16 7355 NP_005928 16 7355 NP_068591 16 7355 NP_060529 16 7355 NP_001129509 16 7355 XP_006725391 16 7355 XP_006725390 16 7355 XP_006725389 16 7355 XP_006725388 16 7355 XP_006725387 16 7355 XP_005258676 16 7355 XP_005257438 16 7355 XP_005257437 16 7355 XP_006721974 16 7355 XP_006721973 16 7355 XP_005257436 16 7355 XP_005256545 16 7355 NP_114096 16 7355 NP_001276024 15 9605 NP_150594 15 9605 NP_001234936 15 9605 NP_006449 15 9605 NP_001234935 15 9605 NP_006565 15 9605 NP_005771 15 9605 NP_001009921 15 9605 NP_001193872 15 9605 NP_001193873 15 9605 XP_006720705 15 9605 XP_005247310 15 9605 XP_005247308 15 9605 XP_006713276 15 9605 XP_005265313 15 9605 XP_005265307 15 9605 NP_056118 15 9605 NP_001094874 15 9605>NP_115803 Length = 1156 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TGSGASQAL 9 TGSGAS+AL Sbjct: 416 TGSGASRAL 424>NP_001161879 Length = 1012 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 626 TGSGSSQEL 634>NP_055804 Length = 1692 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1306 TGSGSSQEL 1314>XP_006715455 Length = 474 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 88 TGSGSSQEL 96>XP_006715452 Length = 1474 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1088 TGSGSSQEL 1096>XP_006715451 Length = 1475 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1098 TGSGSSQEL 1106>XP_006715450 Length = 1498 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1112 TGSGSSQEL 1120>XP_005248745 Length = 1515 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1129 TGSGSSQEL 1137>XP_005248744 Length = 1519 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1133 TGSGSSQEL 1141>XP_005248743 Length = 1525 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1139 TGSGSSQEL 1147>XP_005248742 Length = 1535 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1149 TGSGSSQEL 1157>XP_006715449 Length = 1539 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1153 TGSGSSQEL 1161>XP_006715448 Length = 1549 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1163 TGSGSSQEL 1171>XP_006715447 Length = 1574 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1188 TGSGSSQEL 1196>XP_006715446 Length = 1574 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TGSG+SQ L Sbjct: 1188 TGSGSSQEL 1196>NP_001009811 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG G SQA+ Sbjct: 62 TGPGGSQAI 70>NP_055799 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG G SQA+ Sbjct: 62 TGPGGSQAI 70>XP_005257233 Length = 1046 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG G SQA+ Sbjct: 62 TGPGGSQAI 70>XP_005257231 Length = 1080 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG G SQA+ Sbjct: 62 TGPGGSQAI 70>NP_116218 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 G GA+QAL Sbjct: 260 GQGATQAL 267>XP_006719717 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 G GA+QAL Sbjct: 260 GQGATQAL 267>XP_005254027 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 G GA+QAL Sbjct: 260 GQGATQAL 267>XP_006710433 Length = 1169 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGSGASQ 7 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710432 Length = 1202 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGSGASQ 7 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710431 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGSGASQ 7 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710430 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGSGASQ 7 TGSGAS+ Sbjct: 277 TGSGASR 283>XP_006710429 Length = 1238 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGSGASQ 7 TGSGAS+ Sbjct: 277 TGSGASR 283>NP_005367 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 +G G+SQAL Sbjct: 220 SGIGSSQAL 228>NP_004970 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 +GSG QAL Sbjct: 458 SGSGEEQAL 466>NP_699188 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG+GAS L Sbjct: 171 TGNGASSLL 179>NP_689870 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSGASQ 7 GSGASQ Sbjct: 566 GSGASQ 571>NP_005928 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 433 TGSGAS 438>NP_068591 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GSGASQAL 9 G GASQ L Sbjct: 166 GDGASQGL 173>NP_060529 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSGASQ 7 GSGASQ Sbjct: 823 GSGASQ 828>NP_001129509 Length = 363 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGSGASQA 8 TGSGA+ A Sbjct: 13 TGSGAAPA 20>XP_006725391 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 460 TGSGAS 465>XP_006725390 Length = 1004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 344 TGSGAS 349>XP_006725389 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 407 TGSGAS 412>XP_006725388 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 434 TGSGAS 439>XP_006725387 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 460 TGSGAS 465>XP_005258676 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 GSGASQ 7 GSGASQ Sbjct: 566 GSGASQ 571>XP_005257438 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 460 TGSGAS 465>XP_005257437 Length = 1004 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 344 TGSGAS 349>XP_006721974 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 407 TGSGAS 412>XP_006721973 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 434 TGSGAS 439>XP_005257436 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 460 TGSGAS 465>XP_005256545 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 TG+GAS L Sbjct: 147 TGNGASSLL 155>NP_114096 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TGSGAS 6 TGSGAS Sbjct: 162 TGSGAS 167>NP_001276024 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 +GSGAS L Sbjct: 471 SGSGASSPL 479>NP_150594 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG G QAL Sbjct: 328 TGEGLRQAL 336>NP_001234936 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG G QAL Sbjct: 209 TGEGLRQAL 217>NP_006449 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG G QAL Sbjct: 328 TGEGLRQAL 336>NP_001234935 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG G QAL Sbjct: 328 TGEGLRQAL 336>NP_006565 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 GSG +QAL Sbjct: 116 GSGDAQAL 123>NP_005771 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGSGASQAL 9 TG+GA+ A+ Sbjct: 173 TGAGATAAM 181>NP_001009921 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG SQAL Sbjct: 457 TGGNVSQAL 465>NP_001193872 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 GSG +QAL Sbjct: 116 GSGDAQAL 123>NP_001193873 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 GSG +QAL Sbjct: 116 GSGDAQAL 123>XP_006720705 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 G+G SQAL Sbjct: 16 GAGDSQAL 23>XP_005247310 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG SQAL Sbjct: 457 TGGNVSQAL 465>XP_005247308 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG SQAL Sbjct: 457 TGGNVSQAL 465>XP_006713276 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 +GSGAS L Sbjct: 488 SGSGASSPL 496>XP_005265313 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 +GSGAS L Sbjct: 488 SGSGASSPL 496>XP_005265307 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGSGASQAL 9 +GSGAS L Sbjct: 488 SGSGASSPL 496>NP_056118 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGSGASQAL 9 TG SQAL Sbjct: 455 TGGNVSQAL 463>NP_001094874 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GSGASQAL 9 G+G SQAL Sbjct: 16 GAGDSQAL 23Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.109 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 556,841 Number of extensions: 598 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |