Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_037473 17 4312 NP_071394 17 4312 NP_001177410 17 4312 NP_689982 17 4312 XP_006722779 17 4312 XP_006722778 17 4312 XP_005259585 17 4312 XP_006722777 17 4312 NP_997244 16 5631 NP_056141 16 5631 NP_001164108 16 5631 NP_002843 16 5631 NP_001077415 16 5631 XP_005264468 16 5631 XP_005264467 16 5631 XP_005277570 16 5631 XP_005277569 16 5631 XP_006711309 16 5631 XP_005277568 16 5631 XP_005277567 16 5631 NP_653337 16 5631 NP_001139334 16 7355 NP_001193900 16 7355 NP_002828 16 7355 NP_001103224 16 7355 NP_001138502 16 7355 NP_001193901 16 7355 NP_775271 16 7355 NP_057029 16 7355 NP_001268389 16 7355 NP_001268386 16 7355 NP_001268387 16 7355 XP_006723864 16 7355 XP_005260471 16 7355 XP_006719592 16 7355 XP_006719591 16 7355 NP_000194 15 9605 NP_852478 15 9605 NP_001243725 15 9605 NP_612154 15 9605 NP_060876 15 9605 NP_004523 15 9605 NP_001248327 15 9605 NP_002551 15 9605 NP_001361 15 9605 NP_079030 15 9605 NP_945343 15 9605 XP_006717041 15 9605 XP_005248660 15 9605 XP_005248658 15 9605 XP_006713944 15 9605 XP_006712019 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1314 TCRSTSFNV 1322>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1314 TCRSTSFNV 1322>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1383 TCRSTSFNV 1391>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1383 TCRSTSFNV 1391>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1324 TCRSTSFNV 1332>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1393 TCRSTSFNV 1401>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1393 TCRSTSFNV 1401>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 T RSTSFNV Sbjct: 1393 TCRSTSFNV 1401>NP_037473 Length = 396 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GRSTSFNV 9 G+ST FNV Sbjct: 34 GKSTFFNV 41>NP_071394 Length = 1339 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TGR TSF Sbjct: 793 TGRGTSF 799>NP_001177410 Length = 1275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TGR TSF Sbjct: 729 TGRGTSF 735>NP_689982 Length = 453 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR SFN Sbjct: 128 TGRRVSFN 135>XP_006722779 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR SFN Sbjct: 174 TGRRVSFN 181>XP_006722778 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR SFN Sbjct: 174 TGRRVSFN 181>XP_005259585 Length = 705 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR SFN Sbjct: 128 TGRRVSFN 135>XP_006722777 Length = 751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR SFN Sbjct: 174 TGRRVSFN 181>NP_997244 Length = 3169 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TG STSF Sbjct: 14 TGNSTSF 20>NP_056141 Length = 1071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 926 GRSKSFN 932>NP_001164108 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 925 GRSKSFN 931>NP_002843 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 +GR T FN+ Sbjct: 330 SGRLTGFNI 338>NP_001077415 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 TG+ST+F + Sbjct: 85 TGKSTAFQL 93>XP_005264468 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 TG+ST+F + Sbjct: 112 TGKSTAFQL 120>XP_005264467 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 TG+ST+F + Sbjct: 70 TGKSTAFQL 78>XP_005277570 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 773 GRSKSFN 779>XP_005277569 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 773 GRSKSFN 779>XP_006711309 Length = 973 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 926 GRSKSFN 932>XP_005277568 Length = 1070 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 925 GRSKSFN 931>XP_005277567 Length = 1071 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GRSTSFN 8 GRS SFN Sbjct: 926 GRSKSFN 932>NP_653337 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGRSTSFNV 9 TG+ST+F + Sbjct: 112 TGKSTAFQL 120>NP_001139334 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GR SFN+ Sbjct: 5 GRGQSFNI 12>NP_001193900 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1235 GRSYQFNV 1242>NP_002828 Length = 1997 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1325 GRSYQFNV 1332>NP_001103224 Length = 2215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1543 GRSYQFNV 1550>NP_001138502 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 TGR T+F + Sbjct: 681 TGRLTNFKI 689>NP_001193901 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1235 GRSYQFNV 1242>NP_775271 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 155 TYKSTQFNV 163>NP_057029 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 155 TYKSTQFNV 163>NP_001268389 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 155 TYKSTQFNV 163>NP_001268386 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 41 TYKSTQFNV 49>NP_001268387 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 184 TYKSTQFNV 192>XP_006723864 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 155 TYKSTQFNV 163>XP_005260471 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 T +ST FNV Sbjct: 155 TYKSTQFNV 163>XP_006719592 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1325 GRSYQFNV 1332>XP_006719591 Length = 2230 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GRSTSFNV 9 GRS FNV Sbjct: 1543 GRSYQFNV 1550>NP_000194 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR S+N Sbjct: 103 TGRGLSYN 110>NP_852478 Length = 1179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RSTSFNV 9 R+T+FNV Sbjct: 417 RNTTFNV 423>NP_001243725 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR +FN Sbjct: 162 TGRCVAFN 169>NP_612154 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TGR T+F Sbjct: 119 TGRGTTF 125>NP_060876 Length = 5412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TGR T+F Sbjct: 4406 TGRGTTF 4412>NP_004523 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TGRSTSF 7 TGR T+F Sbjct: 170 TGRGTTF 176>NP_001248327 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR +FN Sbjct: 146 TGRCVAFN 153>NP_002551 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR +FN Sbjct: 146 TGRCVAFN 153>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 TG ST+F V Sbjct: 4124 TGHSTNFVV 4132>NP_079030 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STSFNV 9 STSFN+ Sbjct: 165 STSFNI 170>NP_945343 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GRSTSFN 8 GR+TSF+ Sbjct: 503 GRATSFD 509>XP_006717041 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GRSTSFNV 9 GR T+F+V Sbjct: 679 GRKTNFSV 686>XP_005248660 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STSFNV 9 STSFN+ Sbjct: 13 STSFNI 18>XP_005248658 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 STSFNV 9 STSFN+ Sbjct: 165 STSFNI 170>XP_006713944 Length = 722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGRSTSFN 8 TGR S+N Sbjct: 103 TGRGLSYN 110>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGRSTSFNV 9 TG ST+F V Sbjct: 4124 TGHSTNFVV 4132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.120 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,318 Number of extensions: 736 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |