Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 19 869 NP_001277143 19 869 NP_001077383 19 869 NP_001320 19 869 NP_073713 19 869 XP_005269629 19 869 XP_005269628 19 869 XP_005269627 19 869 XP_005269626 19 869 XP_006717706 19 869 XP_005269625 19 869 XP_005269624 19 869 XP_006717705 19 869 XP_005269622 19 869 XP_005269621 19 869 XP_006717704 19 869 XP_005269619 19 869 XP_005269618 19 869 NP_006273 17 3301 NP_001269165 17 3301 NP_003322 17 3301 NP_004187 17 3301 XP_005260590 17 3301 XP_006723933 17 3301 XP_005260589 17 3301 XP_005260588 17 3301 XP_005260587 17 3301 XP_005268216 17 3301 XP_005268215 17 3301 XP_005268214 17 3301 XP_005268213 17 3301 XP_006714709 17 3301 XP_006714708 17 3301 XP_006714707 17 3301 XP_006714706 17 3301 XP_006714705 17 3301 NP_001107047 17 3301 NP_057592 17 3301 NP_004963 17 4312 NP_001163878 17 4312 NP_001163877 17 4312 NP_001777 17 4312 NP_203698 17 4312 XP_006718146 17 4312 XP_006718145 17 4312 XP_005270360 17 4312 XP_005251512 17 4312 NP_620590 16 5631 NP_001009565 16 5631 XP_006725141 16 5631 XP_006725140 16 5631 XP_005258110 16 5631 XP_006716592 16 5631 XP_006716591 16 5631 XP_006712067 16 5631 XP_006712066 16 5631 NP_001243241 16 7355 NP_006272 16 7355 NP_001243242 16 7355 NP_001277159 15 9605 NP_001789 15 9605 NP_439892 15 9605 NP_660186 15 9605 NP_065802 15 9605 NP_001138551 15 9605 NP_001643 15 9605 NP_003939 15 9605 NP_001072 15 9605 XP_005272547 15 9605 XP_005272546 15 9605 XP_006722863 15 9605 XP_006714470 15 9605 XP_006714469 15 9605 XP_005263392 15 9605 NP_722578 15 9605>NP_001277144 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>NP_001277143 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>NP_001077383 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>NP_001320 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>NP_073713 Length = 985 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 731 TGQAVAVRA 739>XP_005269629 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269628 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269627 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269626 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_006717706 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269625 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269624 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_006717705 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269622 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269621 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_006717704 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269619 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>XP_005269618 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 TGQ VAVRA Sbjct: 191 TGQAVAVRA 199>NP_006273 Length = 487 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 52 TGQIVAIK 59>NP_001269165 Length = 276 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 27 TGQIVAIK 34>NP_003322 Length = 1187 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 TGQVVAVRA 9 TG++VAV+A Sbjct: 923 TGEMVAVKA 931>NP_004187 Length = 358 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 27 TGQIVAIK 34>XP_005260590 Length = 462 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 52 TGQIVAIK 59>XP_006723933 Length = 474 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 39 TGQIVAIK 46>XP_005260589 Length = 474 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 39 TGQIVAIK 46>XP_005260588 Length = 478 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 68 TGQIVAIK 75>XP_005260587 Length = 503 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 68 TGQIVAIK 75>XP_005268216 Length = 301 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 27 TGQIVAIK 34>XP_005268215 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 27 TGQIVAIK 34>XP_005268214 Length = 358 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 27 TGQIVAIK 34>XP_005268213 Length = 993 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 216 TGQIVAIK 223>XP_006714709 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>XP_006714708 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>XP_006714707 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>XP_006714706 Length = 603 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>XP_006714705 Length = 604 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>NP_001107047 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>NP_057592 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQ+VA++ Sbjct: 26 TGQIVAIK 33>NP_004963 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVAV+ Sbjct: 875 TGEVVAVK 882>NP_001163878 Length = 109 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>NP_001163877 Length = 109 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>NP_001777 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>NP_203698 Length = 240 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>XP_006718146 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>XP_006718145 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>XP_005270360 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TGQVVA++ Sbjct: 26 TGQVVAMK 33>XP_005251512 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVAV+ Sbjct: 875 TGEVVAVK 882>NP_620590 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 35 TGEVVAIK 42>NP_001009565 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVAV+ Sbjct: 26 SGQVVAVK 33>XP_006725141 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 35 TGEVVAIK 42>XP_006725140 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 35 TGEVVAIK 42>XP_005258110 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GQVVAVRA 9 GQVVAV A Sbjct: 207 GQVVAVSA 214>XP_006716592 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 35 TGEVVAIK 42>XP_006716591 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 35 TGEVVAIK 42>XP_006712067 Length = 175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVAV+ Sbjct: 26 SGQVVAVK 33>XP_006712066 Length = 342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVAV+ Sbjct: 26 SGQVVAVK 33>NP_001243241 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVA++ Sbjct: 77 SGQVVAIK 84>NP_006272 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVA++ Sbjct: 49 SGQVVAIK 56>NP_001243242 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 +GQVVA++ Sbjct: 49 SGQVVAIK 56>NP_001277159 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 26 TGEVVALK 33>NP_001789 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 26 TGEVVALK 33>NP_439892 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG+VVA++ Sbjct: 26 TGEVVALK 33>NP_660186 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGQVVAVR 8 TG V+AV+ Sbjct: 142 TGHVIAVK 149>NP_065802 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 +G+VVAV A Sbjct: 5 SGEVVAVSA 13>NP_001138551 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGQVVAVRA 9 +G+VVAV A Sbjct: 5 SGEVVAVSA 13>NP_001643 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVVAV 7 TGQ VAV Sbjct: 141 TGQAVAV 147>NP_003939 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG++VA++ Sbjct: 26 TGRIVAIK 33>NP_001072 Length = 3623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVVAV 7 TGQ++AV Sbjct: 1082 TGQLIAV 1088>XP_005272547 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGQVVAVR 8 TG V+AV+ Sbjct: 142 TGHVIAVK 149>XP_005272546 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGQVVAVR 8 TG V+AV+ Sbjct: 158 TGHVIAVK 165>XP_006722863 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGQVVAVR 8 TG V+AV+ Sbjct: 158 TGHVIAVK 165>XP_006714470 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG++VA++ Sbjct: 26 TGRIVAIK 33>XP_006714469 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG++VA++ Sbjct: 26 TGRIVAIK 33>XP_005263392 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 TGQVVAVR 8 TG++VA++ Sbjct: 26 TGRIVAIK 33>NP_722578 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVVAV 7 TGQ++AV Sbjct: 221 TGQMIAV 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.127 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,987 Number of extensions: 505 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |