Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 NP_001004470 18 1935 NP_689599 17 2528 NP_001276876 17 2528 NP_001276959 17 2528 XP_005246354 17 2528 NP_055672 16 5631 NP_075044 16 5631 NP_078989 16 5631 XP_006711756 16 5631 XP_005245738 16 5631 XP_006711755 16 5631 XP_005245737 16 5631 NP_060797 16 5631 NP_116281 16 7355 NP_001273419 16 7355 NP_001273420 16 7355 XP_005254787 16 7355 XP_005254786 16 7355 NP_055627 15 9605 NP_001035864 15 9605 NP_001035863 15 9605 NP_079225 15 9605 NP_067058 15 9605 NP_001245304 15 9605 NP_001245303 15 9605 NP_005133 15 9605 NP_001245305 15 9605 XP_006725047 15 9605 XP_006725046 15 9605 XP_006725045 15 9605 XP_006725044 15 9605 XP_006725043 15 9605 XP_006725042 15 9605 XP_006725041 15 9605 XP_006725040 15 9605 XP_006725039 15 9605 XP_006725038 15 9605 XP_006725037 15 9605 XP_006722890 15 9605 XP_006722889 15 9605 XP_006722888 15 9605 XP_006722887 15 9605 XP_006722886 15 9605 XP_005273967 15 9605 XP_006714375 15 9605 XP_005265836 15 9605 XP_005265835 15 9605 XP_006711915 15 9605 XP_006711914 15 9605 XP_006711913 15 9605 XP_006711912 15 9605 XP_006711911 15 9605 XP_005273418 15 9605 XP_006711910 15 9605 XP_006711909 15 9605 XP_006711908 15 9605 XP_006711907 15 9605 XP_006711906 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVSKDVM 9 TG VSKDVM Sbjct: 1927 TGLVSKDVM 1935>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGQVSKDVM 9 TG VSKDVM Sbjct: 1722 TGLVSKDVM 1730>NP_001004470 Length = 398 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TGQVSKDV 8 TG VSKDV Sbjct: 219 TGDVSKDV 226>NP_689599 Length = 399 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GQVSKDVM 9 GQV+KDV+ Sbjct: 132 GQVAKDVL 139>NP_001276876 Length = 156 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGQVSKDVM 9 TG+VSKD + Sbjct: 9 TGEVSKDAV 17>NP_001276959 Length = 436 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGQVSKDVM 9 TG+VSKD + Sbjct: 289 TGEVSKDAV 297>XP_005246354 Length = 271 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GQVSKDVM 9 GQV+KDV+ Sbjct: 4 GQVAKDVL 11>NP_055672 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVSKD 7 TG VSKD Sbjct: 498 TGDVSKD 504>NP_075044 Length = 835 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GQVSKDV 8 GQV KDV Sbjct: 793 GQVGKDV 799>NP_078989 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGQVSKDV 8 TG ++KDV Sbjct: 289 TGNIAKDV 296>XP_006711756 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVSKD 7 TG VSKD Sbjct: 498 TGDVSKD 504>XP_005245738 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVSKD 7 TG VSKD Sbjct: 461 TGDVSKD 467>XP_006711755 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVSKD 7 TG VSKD Sbjct: 498 TGDVSKD 504>XP_005245737 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 TGQVSKD 7 TG VSKD Sbjct: 498 TGDVSKD 504>NP_060797 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGQVSKDVM 9 TG+V KDV+ Sbjct: 155 TGRVIKDVI 163>NP_116281 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQVSKDVM 9 +G+V+K+VM Sbjct: 320 SGRVAKEVM 328>NP_001273419 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQVSKDVM 9 +G+V+K+VM Sbjct: 226 SGRVAKEVM 234>NP_001273420 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQVSKDVM 9 +G+V+K+VM Sbjct: 86 SGRVAKEVM 94>XP_005254787 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQVSKDVM 9 +G+V+K+VM Sbjct: 320 SGRVAKEVM 328>XP_005254786 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQVSKDVM 9 +G+V+K+VM Sbjct: 315 SGRVAKEVM 323>NP_055627 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 969 TGSPSKDV 976>NP_001035864 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>NP_001035863 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>NP_079225 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QVSKDV 8 QVSKDV Sbjct: 1148 QVSKDV 1153>NP_067058 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>NP_001245304 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>NP_001245303 Length = 910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>NP_005133 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQVSKDVM 9 GQV KD++ Sbjct: 200 GQVLKDIV 207>NP_001245305 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>XP_006725047 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006725046 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006725045 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006725044 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 969 TGSPSKDV 976>XP_006725043 Length = 1593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006725042 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 969 TGSPSKDV 976>XP_006725041 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006725040 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006725039 Length = 1629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006725038 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006725037 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006722890 Length = 750 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>XP_006722889 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>XP_006722888 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>XP_006722887 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 228 TGKLSKD 234>XP_006722886 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGQVSKD 7 TG++SKD Sbjct: 325 TGKLSKD 331>XP_005273967 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQVSKDVM 9 GQV KD++ Sbjct: 175 GQVLKDIV 182>XP_006714375 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QVSKDV 8 QVSKDV Sbjct: 1164 QVSKDV 1169>XP_005265836 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQVSKDVM 9 TG + K+VM Sbjct: 436 TGNMQKEVM 444>XP_005265835 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQVSKDVM 9 TG + K+VM Sbjct: 445 TGNMQKEVM 453>XP_006711915 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006711914 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006711913 Length = 1496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 871 TGSPSKDV 878>XP_006711912 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 969 TGSPSKDV 976>XP_006711911 Length = 1593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_005273418 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 969 TGSPSKDV 976>XP_006711910 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006711909 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006711908 Length = 1629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006711907 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038>XP_006711906 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TGQVSKDV 8 TG SKDV Sbjct: 1031 TGSPSKDV 1038Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.121 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 542,341 Number of extensions: 919 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |