Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001002912 17 3301 NP_056161 17 3301 XP_006720156 17 3301 XP_005270507 17 3301 XP_006710414 17 3301 XP_006710413 17 3301 XP_006710412 17 3301 XP_006710411 17 3301 NP_001186114 17 4312 NP_001186112 17 4312 NP_001186108 17 4312 NP_001001485 17 4312 NP_001186113 17 4312 NP_001001486 17 4312 NP_055197 17 4312 NP_001186110 17 4312 NP_001186109 17 4312 NP_001001487 17 4312 NP_001186111 17 4312 XP_005247416 17 4312 XP_005247415 17 4312 XP_005247414 17 4312 XP_005247413 17 4312 XP_006713648 17 4312 XP_005247412 17 4312 XP_005247411 17 4312 NP_001399 16 7355 XP_006710468 16 7355 XP_005270637 16 7355 NP_000535 15 9605 NP_061313 15 9605 NP_783161 15 9605 NP_001157413 15 9605 NP_001276972 15 9605 NP_001269221 15 9605 NP_009119 15 9605 NP_001269220 15 9605 NP_848654 15 9605 NP_001269222 15 9605 XP_005250008 15 9605 XP_006715921 15 9605 XP_005250007 15 9605>NP_001002912 Length = 1530 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 1237 TGQAEELA 1244>NP_056161 Length = 2539 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GQSQELAI 9 GQSQ+LA+ Sbjct: 1994 GQSQDLAL 2001>XP_006720156 Length = 2497 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GQSQELAI 9 GQSQ+LA+ Sbjct: 1994 GQSQDLAL 2001>XP_005270507 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 495 TGQAEELA 502>XP_006710414 Length = 834 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 541 TGQAEELA 548>XP_006710413 Length = 848 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 555 TGQAEELA 562>XP_006710412 Length = 1333 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 1040 TGQAEELA 1047>XP_006710411 Length = 1528 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TGQSQELA 8 TGQ++ELA Sbjct: 1235 TGQAEELA 1242>NP_001186114 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_001186112 Length = 923 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 554 TGDSQETAV 562>NP_001186108 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_001001485 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_001186113 Length = 903 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 554 TGDSQETAV 562>NP_001001486 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_055197 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_001186110 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 604 TGDSQETAV 612>NP_001186109 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 604 TGDSQETAV 612>NP_001001487 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>NP_001186111 Length = 944 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 565 TGDSQETAV 573>XP_005247416 Length = 922 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 604 TGDSQETAV 612>XP_005247415 Length = 933 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 554 TGDSQETAV 562>XP_005247414 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>XP_005247413 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>XP_006713648 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>XP_005247412 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 570 TGDSQETAV 578>XP_005247411 Length = 983 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TG SQE A+ Sbjct: 604 TGDSQETAV 612>NP_001399 Length = 2923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQSQELAI 9 +G+SQ+LA+ Sbjct: 2049 SGRSQQLAL 2057>XP_006710468 Length = 2916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQSQELAI 9 +G+SQ+LA+ Sbjct: 2049 SGRSQQLAL 2057>XP_005270637 Length = 2921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TGQSQELAI 9 +G+SQ+LA+ Sbjct: 2049 SGRSQQLAL 2057>NP_000535 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 610 GQKQRLAI 617>NP_061313 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 610 GQKQRLAI 617>NP_783161 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TGQ+QE + Sbjct: 606 TGQAQETQV 614>NP_001157413 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 1159 GQKQRLAI 1166>NP_001276972 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 610 GQKQRLAI 617>NP_001269221 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 598 GQKQRLAI 605>NP_009119 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 598 GQKQRLAI 605>NP_001269220 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 615 GQKQRLAI 622>NP_848654 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 714 GQKQRLAI 721>NP_001269222 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GQSQELAI 9 GQ Q LAI Sbjct: 510 GQKQRLAI 517>XP_005250008 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TGQ+QE + Sbjct: 397 TGQAQETQV 405>XP_006715921 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TGQ+QE + Sbjct: 606 TGQAQETQV 614>XP_005250007 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGQSQELAI 9 TGQ+QE + Sbjct: 606 TGQAQETQV 614Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.117 0.278 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,266 Number of extensions: 817 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |