Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001121619                                                           20     509
NP_000258                                                              20     509
NP_001035957                                                           20     509
XP_006721991                                                           20     509
XP_006721990                                                           20     509
XP_006721989                                                           20     509
XP_005258041                                                           20     509
XP_006721988                                                           20     509
XP_006721987                                                           20     509
XP_006721986                                                           20     509
XP_005258040                                                           20     509
XP_006721985                                                           20     509
NP_001073932                                                           18    1482
NP_001368                                                              18    1482
XP_006718966                                                           18    1482
NP_065861                                                              17    4312
XP_005267973                                                           17    4312
NP_060170                                                              16    5631
NP_001229658                                                           16    5631
NP_872288                                                              16    5631
NP_443109                                                              16    5631
NP_006026                                                              16    5631
NP_963836                                                              16    5631
XP_005268287                                                           16    5631
XP_005268286                                                           16    5631
XP_005268285                                                           16    5631
XP_005268284                                                           16    5631
NP_872287                                                              16    5631
NP_001157915                                                           16    7355
NP_004897                                                              16    7355
NP_001257460                                                           16    7355
XP_006710602                                                           16    7355
XP_006710601                                                           16    7355
XP_006710598                                                           16    7355
XP_006710597                                                           16    7355
XP_006710596                                                           16    7355
XP_006710595                                                           16    7355
XP_006710594                                                           16    7355
XP_006710593                                                           16    7355
XP_006710592                                                           16    7355
XP_006710591                                                           16    7355
XP_006710590                                                           16    7355
XP_006710589                                                           16    7355
XP_006710588                                                           16    7355
XP_006710587                                                           16    7355
XP_006710586                                                           16    7355
XP_006710585                                                           16    7355
XP_005270755                                                           16    7355
XP_006710584                                                           16    7355
XP_005270754                                                           16    7355
XP_005270753                                                           16    7355
XP_006710583                                                           16    7355
XP_005270752                                                           16    7355
XP_006710582                                                           16    7355
XP_005270751                                                           16    7355
NP_001157745                                                           15    9605
NP_001157871                                                           15    9605
NP_001074010                                                           15    9605
NP_758953                                                              15    9605
NP_612373                                                              15    9605
NP_705836                                                              15    9605
XP_005258637                                                           15    9605
XP_005258636                                                           15    9605
XP_005254311                                                           15    9605
XP_006720508                                                           15    9605
XP_006720507                                                           15    9605
XP_005254310                                                           15    9605
XP_005254309                                                           15    9605
XP_005254306                                                           15    9605
XP_005254305                                                           15    9605
XP_005254304                                                           15    9605
XP_005254303                                                           15    9605
XP_006720506                                                           15    9605
XP_005254302                                                           15    9605
XP_005254301                                                           15    9605
XP_006720505                                                           15    9605
XP_005254300                                                           15    9605
XP_005267412                                                           15    9605
XP_005267411                                                           15    9605
XP_005263397                                                           15    9605
XP_005263396                                                           15    9605
XP_005263395                                                           15    9605
XP_005245344                                                           15    9605
>NP_001121619
          Length = 593

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>NP_000258
          Length = 2818

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>NP_001035957
          Length = 2839

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721991
          Length = 1632

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721990
          Length = 2823

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721989
          Length = 2823

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_005258041
          Length = 2836

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721988
          Length = 2846

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721987
          Length = 2849

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721986
          Length = 2854

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 12 TGQQNTHTK 20
>XP_005258040
          Length = 2857

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>XP_006721985
          Length = 2867

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TGQQNT TK
Sbjct: 25 TGQQNTHTK 33
>NP_001073932
          Length = 4314

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    TGQQNTLTK 9
            TGQ NTL K
Sbjct: 1070 TGQHNTLDK 1078
>NP_001368
          Length = 4307

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    TGQQNTLTK 9
            TGQ NTL K
Sbjct: 1070 TGQHNTLDK 1078
>XP_006718966
          Length = 4300

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    TGQQNTLTK 9
            TGQ NTL K
Sbjct: 1070 TGQHNTLDK 1078
>NP_065861
          Length = 509

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TGQQNTLTK 9
           +G+QN +TK
Sbjct: 256 SGEQNMMTK 264
>XP_005267973
          Length = 537

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TGQQNTLTK 9
           +G+QN +TK
Sbjct: 284 SGEQNMMTK 292
>NP_060170
          Length = 219

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TG++N +TK
Sbjct: 7  TGKENMVTK 15
>NP_001229658
          Length = 777

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TGQQNTLTK 9
          TG++N +TK
Sbjct: 7  TGKENMVTK 15
>NP_872288
          Length = 109

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  QNTLTK 9
          QNTLTK
Sbjct: 84 QNTLTK 89
>NP_443109
          Length = 301

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TGQQNTLTK 9
          +GQ NTL K
Sbjct: 53 SGQLNTLNK 61
>NP_006026
          Length = 1711

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   QQNTLTK 9
           Q NTLTK
Sbjct: 420 QSNTLTK 426
>NP_963836
          Length = 268

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  TGQQNTLTK 9
          +GQ NTL K
Sbjct: 53 SGQLNTLNK 61
>XP_005268287
          Length = 1490

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   QQNTLTK 9
           Q NTLTK
Sbjct: 420 QSNTLTK 426
>XP_005268286
          Length = 1685

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   QQNTLTK 9
           Q NTLTK
Sbjct: 420 QSNTLTK 426
>XP_005268285
          Length = 1702

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   QQNTLTK 9
           Q NTLTK
Sbjct: 420 QSNTLTK 426
>XP_005268284
          Length = 1728

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   QQNTLTK 9
           Q NTLTK
Sbjct: 420 QSNTLTK 426
>NP_872287
          Length = 109

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  QNTLTK 9
          QNTLTK
Sbjct: 84 QNTLTK 89
>NP_001157915
          Length = 1873

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TGQQNTLTK 9
            +GQQ+T+ K
Sbjct: 1676 SGQQDTIKK 1684
>NP_004897
          Length = 396

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   TGQQNTLT 8
           TG +N+LT
Sbjct: 343 TGSENSLT 350
>NP_001257460
          Length = 396

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   TGQQNTLT 8
           TG +N+LT
Sbjct: 343 TGSENSLT 350
>XP_006710602
          Length = 7391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3290 TGQQNAI 3296
>XP_006710601
          Length = 4720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710598
          Length = 7553

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3280 TGQQNAI 3286
>XP_006710597
          Length = 7451

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3290 TGQQNAI 3296
>XP_006710596
          Length = 7512

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3239 TGQQNAI 3245
>XP_006710595
          Length = 7526

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3253 TGQQNAI 3259
>XP_006710594
          Length = 7528

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3255 TGQQNAI 3261
>XP_006710593
          Length = 7539

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3266 TGQQNAI 3272
>XP_006710592
          Length = 7544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3271 TGQQNAI 3277
>XP_006710591
          Length = 7558

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3285 TGQQNAI 3291
>XP_006710590
          Length = 7563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3290 TGQQNAI 3296
>XP_006710589
          Length = 7595

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3322 TGQQNAI 3328
>XP_006710588
          Length = 7614

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710587
          Length = 7645

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710586
          Length = 7645

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710585
          Length = 7657

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_005270755
          Length = 7663

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710584
          Length = 7686

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_005270754
          Length = 7694

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_005270753
          Length = 7700

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710583
          Length = 7702

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_005270752
          Length = 7717

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_006710582
          Length = 7720

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>XP_005270751
          Length = 7723

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    TGQQNTL 7
            TGQQN +
Sbjct: 3450 TGQQNAI 3456
>NP_001157745
          Length = 3065

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2483 GQKNLLTR 2490
>NP_001157871
          Length = 793

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   QQNTLTK 9
           ++NTLTK
Sbjct: 787 EKNTLTK 793
>NP_001074010
          Length = 2856

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2274 GQKNLLTR 2281
>NP_758953
          Length = 422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GQQNTLT 8
           GQQ T+T
Sbjct: 111 GQQGTIT 117
>NP_612373
          Length = 845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TGQ NT+
Sbjct: 569 TGQSNTV 575
>NP_705836
          Length = 417

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TG QNT+
Sbjct: 201 TGSQNTV 207
>XP_005258637
          Length = 383

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TG QNT+
Sbjct: 167 TGSQNTV 173
>XP_005258636
          Length = 417

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TG QNT+
Sbjct: 201 TGSQNTV 207
>XP_005254311
          Length = 1627

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 1045 GQKNLLTR 1052
>XP_006720508
          Length = 2658

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2076 GQKNLLTR 2083
>XP_006720507
          Length = 2763

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2181 GQKNLLTR 2188
>XP_005254310
          Length = 2906

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2324 GQKNLLTR 2331
>XP_005254309
          Length = 2956

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2374 GQKNLLTR 2381
>XP_005254306
          Length = 3066

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2484 GQKNLLTR 2491
>XP_005254305
          Length = 3114

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2532 GQKNLLTR 2539
>XP_005254304
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_005254303
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_006720506
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_005254302
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_005254301
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_006720505
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_005254300
          Length = 3115

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    GQQNTLTK 9
            GQ+N LT+
Sbjct: 2533 GQKNLLTR 2540
>XP_005267412
          Length = 378

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GQQNTLT 8
          GQQ T+T
Sbjct: 67 GQQGTIT 73
>XP_005267411
          Length = 410

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GQQNTLT 8
           GQQ T+T
Sbjct: 99  GQQGTIT 105
>XP_005263397
          Length = 540

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TGQ NT+
Sbjct: 264 TGQSNTV 270
>XP_005263396
          Length = 732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TGQ NT+
Sbjct: 456 TGQSNTV 462
>XP_005263395
          Length = 766

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TGQQNTL 7
           TGQ NT+
Sbjct: 490 TGQSNTV 496
>XP_005245344
          Length = 341

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  TGQQNTLT 8
          TGQ  TLT
Sbjct: 80 TGQMATLT 87
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.295    0.110    0.281 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 506,421
Number of extensions: 983
Number of successful extensions: 83
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 83
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.1 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package