Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 665 NP_000391 17 4312 XP_005258696 17 4312 NP_005236 16 5631 XP_006714202 16 5631 XP_005262892 16 5631 XP_005262891 16 5631 NP_004037 16 7355 NP_001001937 16 7355 NP_001244264 16 7355 NP_001001935 16 7355 NP_689544 16 7355 NP_114120 16 7355 NP_001010883 16 7355 NP_001032238 16 7355 NP_001244263 16 7355 NP_006812 16 7355 XP_005276505 16 7355 XP_005268309 16 7355 XP_006720336 16 7355 XP_006720335 16 7355 XP_006720097 16 7355 NP_000083 15 9605 NP_001035373 15 9605 NP_000148 15 9605 NP_001005742 15 9605 NP_001165282 15 9605 NP_001005741 15 9605 NP_000017 15 9605 NP_071926 15 9605 NP_066013 15 9605 NP_001029345 15 9605 NP_001012303 15 9605 NP_006208 15 9605 XP_006726274 15 9605 XP_005259205 15 9605 XP_005259203 15 9605 XP_006723383 15 9605 XP_006720685 15 9605 XP_005268179 15 9605 XP_006720330 15 9605 XP_006714856 15 9605 XP_005268556 15 9605 XP_006714855 15 9605 XP_006714854 15 9605 XP_005268555 15 9605 XP_005268554 15 9605 XP_005265384 15 9605 XP_006712315 15 9605 XP_006712314 15 9605 XP_005246339 15 9605 XP_006712313 15 9605 XP_006712312 15 9605 XP_006712311 15 9605 XP_006712310 15 9605 XP_006712309 15 9605 XP_005246338 15 9605 XP_006711333 15 9605 NP_001116850 15 9605>NP_443179 Length = 2170 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGMTLILEP 9 TGMTLIL P Sbjct: 427 TGMTLILGP 435>NP_000391 Length = 760 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G T+I+EP Sbjct: 413 GFTIIIEP 420>XP_005258696 Length = 736 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G T+I+EP Sbjct: 389 GFTIIIEP 396>NP_005236 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ ILEP Sbjct: 417 TGLISILEP 425Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM IL P Sbjct: 771 TGMLKILSP 779>XP_006714202 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ ILEP Sbjct: 417 TGLISILEP 425Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM IL P Sbjct: 771 TGMLKILSP 779>XP_005262892 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ ILEP Sbjct: 417 TGLISILEP 425Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM IL P Sbjct: 771 TGMLKILSP 779>XP_005262891 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ ILEP Sbjct: 417 TGLISILEP 425Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM IL P Sbjct: 771 TGMLKILSP 779>NP_004037 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 GM+L LEP Sbjct: 104 GMSLNLEP 111>NP_001001937 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 GM+L LEP Sbjct: 104 GMSLNLEP 111>NP_001244264 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 GM+L LEP Sbjct: 54 GMSLNLEP 61>NP_001001935 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 GM+L LEP Sbjct: 54 GMSLNLEP 61>NP_689544 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 4 TLILEP 9>NP_114120 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTLILEP 9 +TL+LEP Sbjct: 467 VTLVLEP 473>NP_001010883 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ ILEP Sbjct: 245 TGVESILEP 253>NP_001032238 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 4 TLILEP 9>NP_001244263 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 GM+L LEP Sbjct: 104 GMSLNLEP 111>NP_006812 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 66 TLILEP 71>XP_005276505 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 4 TLILEP 9>XP_005268309 Length = 154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 4 TLILEP 9>XP_006720336 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTLILEP 9 +TL+LEP Sbjct: 396 VTLVLEP 402>XP_006720335 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MTLILEP 9 +TL+LEP Sbjct: 467 VTLVLEP 473>XP_006720097 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TLILEP 9 TLILEP Sbjct: 4 TLILEP 9>NP_000083 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>NP_001035373 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 T TLIL+P Sbjct: 252 THSTLILQP 260>NP_000148 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 102 TGLLLTLQP 110>NP_001005742 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 102 TGLLLTLQP 110>NP_001165282 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 15 TGLLLTLQP 23>NP_001005741 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 102 TGLLLTLQP 110>NP_000017 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MTLILEP 9 MTL+++P Sbjct: 312 MTLVMDP 318>NP_071926 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1293 GFTLILE 1299>NP_066013 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGMTLILE 8 TG TL+L+ Sbjct: 1099 TGQTLLLQ 1106>NP_001029345 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL+L+P Sbjct: 612 GNTLVLKP 619>NP_001012303 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMTLILE 8 G+TL+LE Sbjct: 61 GITLVLE 67>NP_006208 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GMTLILE 8 G+TL+LE Sbjct: 51 GITLVLE 57>XP_006726274 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 102 TGLLLTLQP 110>XP_005259205 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 T TLIL+P Sbjct: 252 THSTLILQP 260>XP_005259203 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 T TLIL+P Sbjct: 255 THSTLILQP 263>XP_006723383 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 T TLIL+P Sbjct: 252 THSTLILQP 260>XP_006720685 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGMTLILE 8 TG TL+L+ Sbjct: 514 TGQTLLLQ 521>XP_005268179 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM L EP Sbjct: 277 TGMLLQFEP 285>XP_006720330 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGMTLILEP 9 TGM L EP Sbjct: 479 TGMLLQFEP 487>XP_006714856 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1095 GFTLILE 1101>XP_005268556 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1215 GFTLILE 1221>XP_006714855 Length = 1473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1222 GFTLILE 1228>XP_006714854 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1235 GFTLILE 1241>XP_005268555 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1273 GFTLILE 1279>XP_005268554 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GMTLILE 8 G TLILE Sbjct: 1293 GFTLILE 1299>XP_005265384 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 T TL+L+P Sbjct: 524 TAATLLLDP 532>XP_006712315 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712314 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_005246339 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712313 Length = 1608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712312 Length = 1611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712311 Length = 1612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712310 Length = 1612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006712309 Length = 1627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_005246338 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMTLILEP 9 G TL++EP Sbjct: 255 GPTLLVEP 262>XP_006711333 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGMTLILEP 9 TG+ L L+P Sbjct: 102 TGLLLTLQP 110>NP_001116850 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MTLILEP 9 MTL+++P Sbjct: 312 MTLVMDP 318Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.141 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 504,410 Number of extensions: 891 Number of successful extensions: 63 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |