Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 NP_079039 18 1482 NP_996897 18 1482 XP_005271269 18 1482 NP_001123488 17 2528 NP_001123489 17 2528 NP_001170 17 2528 XP_005263062 17 2528 XP_005263061 17 2528 XP_005263060 17 2528 XP_005263059 17 2528 XP_006714283 17 2528 XP_005263056 17 2528 XP_006714282 17 2528 XP_006714281 17 2528 XP_005263054 17 2528 NP_001159395 17 3301 NP_000536 17 3301 NP_000449 17 3301 XP_005253988 17 3301 NP_004470 16 5631 XP_005271428 16 5631 NP_005110 16 5631 NP_001136075 16 7355 NP_055588 16 7355 NP_008832 16 7355 NP_001129198 16 7355 NP_078843 16 7355 XP_005254461 16 7355 XP_006720603 16 7355 XP_006720602 16 7355 XP_006716461 16 7355 XP_005273698 16 7355 XP_005273697 16 7355 XP_005273696 16 7355 XP_005273695 16 7355 XP_005273694 16 7355 XP_005273693 16 7355 XP_005273692 16 7355 XP_006716460 16 7355 XP_006716459 16 7355 XP_005268609 16 7355 XP_005268608 16 7355 XP_005268607 16 7355 XP_005268606 16 7355 XP_005268605 16 7355 XP_005268604 16 7355 NP_002290 15 9605 NP_065801 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGLNQSRMG 9 TGLNQSR G Sbjct: 1067 TGLNQSRTG 1075>NP_079039 Length = 848 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG NQSRM Sbjct: 82 TGANQSRM 89>NP_996897 Length = 545 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG NQSRM Sbjct: 82 TGANQSRM 89>XP_005271269 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG NQSRM Sbjct: 82 TGANQSRM 89>NP_001123488 Length = 389 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>NP_001123489 Length = 367 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>NP_001170 Length = 378 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263062 Length = 353 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263061 Length = 356 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263060 Length = 357 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263059 Length = 363 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_006714283 Length = 368 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263056 Length = 378 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_006714282 Length = 379 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_006714281 Length = 390 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>XP_005263054 Length = 400 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GLNQSRMG 9 GLNQ+R G Sbjct: 174 GLNQARFG 181>NP_001159395 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TGLNQS + Sbjct: 143 TGLNQSHL 150>NP_000536 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TGLNQS + Sbjct: 137 TGLNQSHL 144>NP_000449 Length = 557 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TGLNQS + Sbjct: 143 TGLNQSHL 150>XP_005253988 Length = 662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TGLNQS + Sbjct: 137 TGLNQSHL 144>NP_004470 Length = 342 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TGLNQSR 7 TG+N+SR Sbjct: 288 TGMNESR 294>XP_005271428 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGLNQSRMG 9 TG ++SR+G Sbjct: 420 TGFDKSRLG 428>NP_005110 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGLNQSRMG 9 TG ++SR+G Sbjct: 807 TGFDKSRLG 815>NP_001136075 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>NP_055588 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>NP_008832 Length = 2548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>NP_001129198 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>NP_078843 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005254461 Length = 2600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG+ QSR+ Sbjct: 785 TGIRQSRL 792>XP_006720603 Length = 2619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>XP_006720602 Length = 2619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TGLNQSRM 8 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>XP_006716461 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273698 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273697 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273696 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273695 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273694 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273693 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273692 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_006716460 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_006716459 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TGLNQSRM 8 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005268609 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>XP_005268608 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>XP_005268607 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>XP_005268606 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>XP_005268605 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>XP_005268604 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TGLNQSRMG 9 TGL + R+G Sbjct: 155 TGLREPRLG 163>NP_002290 Length = 1927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLNQSRM 8 GLN+SR+ Sbjct: 1654 GLNKSRL 1660>NP_065801 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GLNQSRM 8 GLN++RM Sbjct: 715 GLNRARM 721Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.126 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,423 Number of extensions: 402 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |