Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 869 XP_005264617 18 1482 NP_001136155 18 1482 NP_001001991 17 2528 NP_001269605 17 2528 NP_056245 17 2528 NP_001269604 17 2528 NP_066973 17 2528 NP_001171545 17 2528 XP_005268816 17 2528 XP_005268815 17 2528 XP_005268814 17 2528 XP_005268813 17 2528 XP_005268812 17 2528 XP_005268811 17 2528 NP_004095 17 4312 NP_114160 17 4312 NP_001073892 17 4312 XP_005254003 17 4312 XP_005254002 17 4312 XP_005272295 16 5631 NP_004651 16 7355 NP_001116137 16 7355 NP_001347 16 7355 NP_001180346 16 7355 NP_001180345 16 7355 XP_006724941 16 7355 XP_005262621 16 7355 XP_006724940 16 7355 NP_004930 15 9605 NP_001075224 15 9605 NP_001265844 15 9605 NP_000492 15 9605 NP_001265842 15 9605 NP_001265846 15 9605 NP_001265843 15 9605 NP_001265868 15 9605 NP_061722 15 9605 NP_001136099 15 9605 NP_001136100 15 9605 NP_060614 15 9605 XP_006715941 15 9605 XP_006715939 15 9605 XP_006715937 15 9605 XP_005250245 15 9605 XP_005250244 15 9605 NP_114089 15 9605>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 T GIAARSY Sbjct: 1060 TRGIAARSY 1068>XP_005264617 Length = 442 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGG AAR+Y Sbjct: 30 TGGPAARAY 38>NP_001136155 Length = 440 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGG AAR+Y Sbjct: 30 TGGPAARAY 38>NP_001001991 Length = 720 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGGIAA S+ Sbjct: 665 TGGIAAVSF 673>NP_001269605 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGGIAA S+ Sbjct: 554 TGGIAAVSF 562>NP_056245 Length = 737 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGGIAA S+ Sbjct: 682 TGGIAAVSF 690>NP_001269604 Length = 680 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TGGIAARSY 9 TGGIAA S+ Sbjct: 625 TGGIAAVSF 633>NP_066973 Length = 1076 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 86 GGIAARS 92>NP_001171545 Length = 1061 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 86 GGIAARS 92>XP_005268816 Length = 1062 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268815 Length = 1077 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268814 Length = 1102 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 60 GGIAARS 66>XP_005268813 Length = 1114 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268812 Length = 1128 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 87 GGIAARS 93>XP_005268811 Length = 1129 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GGIAARS Sbjct: 87 GGIAARS 93>NP_004095 Length = 2511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 TGG+A SY Sbjct: 677 TGGMAFHSY 685>NP_114160 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 TGG A RS+ Sbjct: 275 TGGAAGRSH 283>NP_001073892 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GGIAARS 8 GG+AARS Sbjct: 178 GGLAARS 184>XP_005254003 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 TGG A RS+ Sbjct: 276 TGGAAGRSH 284>XP_005254002 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 TGG A RS+ Sbjct: 284 TGGAAGRSH 292>XP_005272295 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TGGIAARS 8 TGG +ARS Sbjct: 120 TGGASARS 127>NP_004651 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 592 SGGFGARDY 600>NP_001116137 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 592 SGGFGARDY 600>NP_001347 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 594 SGGFGARDY 602>NP_001180346 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 578 SGGFGARDY 586>NP_001180345 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 593 SGGFGARDY 601>XP_006724941 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 569 SGGFGARDY 577>XP_005262621 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 589 SGGFGARDY 597>XP_006724940 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 TGGIAARSY 9 +GG AR Y Sbjct: 592 SGGFGARDY 600>NP_004930 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 325 GGVAAR 330>NP_001075224 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 676 GGVAAR 681>NP_001265844 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 701 GGVAAR 706>NP_000492 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 695 GGVAAR 700>NP_001265842 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 614 GGVAAR 619>NP_001265846 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 685 GGVAAR 690>NP_001265843 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 671 GGVAAR 676>NP_001265868 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 757 GGVAAR 762>NP_061722 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GGIAARS 8 GGI ARS Sbjct: 232 GGIPARS 238>NP_001136099 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 +GG ARSY Sbjct: 328 SGGGPARSY 336>NP_001136100 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 +GG ARSY Sbjct: 306 SGGGPARSY 314>NP_060614 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGGIAARSY 9 +GG ARSY Sbjct: 328 SGGGPARSY 336>XP_006715941 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 527 GGVAAR 532>XP_006715939 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 658 GGVAAR 663>XP_006715937 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 677 GGVAAR 682>XP_005250245 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 681 GGVAAR 686>XP_005250244 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GGIAAR 7 GG+AAR Sbjct: 683 GGVAAR 688>NP_114089 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 GGIAARS 8 GGI ARS Sbjct: 232 GGIPARS 238Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.131 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,484 Number of extensions: 761 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |