Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001274103 17 4312 NP_000343 17 4312 NP_150229 17 4312 NP_005679 17 4312 XP_005257495 17 4312 XP_005257489 17 4312 XP_006718349 17 4312 XP_005247116 17 4312 XP_005247115 17 4312 NP_001166206 17 4312 NP_056383 17 4312 NP_001155155 16 5631 NP_733764 16 5631 NP_653273 16 5631 NP_004906 16 5631 NP_997511 16 5631 NP_058198 16 5631 NP_997512 16 5631 NP_997510 16 5631 NP_997057 16 5631 NP_003777 16 5631 NP_036213 16 5631 XP_005257820 16 5631 XP_006714638 16 5631 XP_006714637 16 5631 NP_001135977 16 5631 NP_071452 16 5631 NP_005912 16 7355 NP_000483 16 7355 NP_689618 16 7355 NP_569079 16 7355 NP_064520 16 7355 NP_001269285 16 7355 NP_060720 16 7355 NP_055127 16 7355 NP_599028 16 7355 NP_439897 16 7355 NP_006176 16 7355 NP_001166033 16 7355 NP_065166 16 7355 NP_001273490 16 7355 XP_006723895 16 7355 XP_006718869 16 7355 XP_006718633 16 7355 XP_006718632 16 7355 XP_006718631 16 7355 XP_006718630 16 7355 XP_006718629 16 7355 XP_006718628 16 7355 XP_006718627 16 7355 XP_006718626 16 7355 XP_006718625 16 7355 XP_006716420 16 7355 XP_006716419 16 7355 XP_006715905 16 7355 XP_005249289 16 7355 XP_005248577 16 7355 XP_005248576 16 7355 XP_005248487 16 7355 NP_001138631 16 7355 NP_116222 15 9605 NP_660187 15 9605 NP_149163 15 9605 NP_115972 15 9605 NP_000383 15 9605 NP_001012661 15 9605 NP_775871 15 9605 XP_006717694 15 9605 XP_006717693 15 9605 XP_005245608 15 9605 NP_997234 15 9605>NP_001274103 Length = 1582 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 831 SGGQRQRIS 839>NP_000343 Length = 1581 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 830 SGGQRQRIS 838>NP_150229 Length = 1359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 604 SGGQRQRIS 612>NP_005679 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 686 SGGQRQRIS 694>XP_005257495 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGAQRKR 7 TGA+RKR Sbjct: 3 TGARRKR 9>XP_005257489 Length = 424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TGAQRKR 7 TGA+RKR Sbjct: 3 TGARRKR 9>XP_006718349 Length = 1646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 830 SGGQRQRIS 838>XP_005247116 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 686 SGGQRQRIS 694>XP_005247115 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+RIS Sbjct: 686 SGGQRQRIS 694>NP_001166206 Length = 525 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TG +RK++S Sbjct: 57 TGGRRKKVS 65>NP_056383 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TG +RK++S Sbjct: 57 TGGRRKKVS 65>NP_001155155 Length = 1060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 T AQR+R+S Sbjct: 991 THAQRRRLS 999>NP_733764 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 T AQR+R+S Sbjct: 746 THAQRRRLS 754>NP_653273 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 T AQR+R+S Sbjct: 1070 THAQRRRLS 1078>NP_004906 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 218 SGGQRKRLA 226>NP_997511 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 196 SGGQRKRLA 204>NP_058198 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 218 SGGQRKRLA 226>NP_997512 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 215 SGGQRKRLA 223>NP_997510 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 220 SGGQRKRLA 228>NP_997057 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 229 SGGQRKRLA 237>NP_003777 Length = 1527 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+R+S Sbjct: 752 SGGQRQRVS 760>NP_036213 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AQRKRIS 9 AQRKR+S Sbjct: 574 AQRKRLS 580>XP_005257820 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QR+R+S Sbjct: 688 SGGQRQRVS 696>XP_006714638 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AQRKRIS 9 AQRKR+S Sbjct: 519 AQRKRLS 525>XP_006714637 Length = 589 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 AQRKRIS 9 AQRKR+S Sbjct: 574 AQRKRLS 580>NP_001135977 Length = 646 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 202 SGGQRKRLA 210>NP_071452 Length = 646 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G QRKR++ Sbjct: 202 SGGQRKRLA 210>NP_005912 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G +RKR+S Sbjct: 268 GVRRKRVS 275>NP_000483 Length = 1480 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 +G QR RIS Sbjct: 549 SGGQRARIS 557>NP_689618 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G QR+R+S Sbjct: 881 GLQRRRVS 888>NP_569079 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GAQRKRIS 9 GA+R+R+S Sbjct: 68 GAKRRRLS 75>NP_064520 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GAQRKRIS 9 GA+R+R+S Sbjct: 68 GAKRRRLS 75>NP_001269285 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TGA+RK+ S Sbjct: 2 TGAKRKKKS 10>NP_060720 Length = 658 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G +RKR+S Sbjct: 564 SGKKRKRVS 572>NP_055127 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TG++ KR+S Sbjct: 85 TGSKSKRVS 93>NP_599028 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TGA+RK+ S Sbjct: 2 TGAKRKKKS 10>NP_439897 Length = 656 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TGA+RK+ S Sbjct: 2 TGAKRKKKS 10>NP_006176 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>NP_001166033 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G +RKR+S Sbjct: 540 SGKKRKRVS 548>NP_065166 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G+QR R+S Sbjct: 240 GSQRSRVS 247>NP_001273490 Length = 2101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1969 TRQQRKRVS 1977>XP_006723895 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G+QR R+S Sbjct: 240 GSQRSRVS 247>XP_006718869 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 TG++ KR+S Sbjct: 28 TGSKSKRVS 36>XP_006718633 Length = 2101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1969 TRQQRKRVS 1977>XP_006718632 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718631 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718630 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718629 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718628 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718627 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718626 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006718625 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 T QRKR+S Sbjct: 1983 TRQQRKRVS 1991>XP_006716420 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G +RKR+S Sbjct: 564 SGKKRKRVS 572>XP_006716419 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G +RKR+S Sbjct: 564 SGKKRKRVS 572>XP_006715905 Length = 1588 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TGAQRKRIS 9 +G QR RIS Sbjct: 657 SGGQRARIS 665>XP_005249289 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GAQRKRIS 9 GA+R+R+S Sbjct: 68 GAKRRRLS 75>XP_005248577 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G +RKR+S Sbjct: 105 GVRRKRVS 112>XP_005248576 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G +RKR+S Sbjct: 131 GVRRKRVS 138>XP_005248487 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 G QR+R+S Sbjct: 840 GLQRRRVS 847>NP_001138631 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G +RKR+S Sbjct: 543 SGKKRKRVS 551>NP_116222 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGAQRKRI 8 TG RKR+ Sbjct: 5 TGGSRKRL 12>NP_660187 Length = 1344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 635 SGGQKQRIS 643>NP_149163 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 635 SGGQKQRIS 643>NP_115972 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 635 SGGQKQRIS 643>NP_000383 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 762 SGGQKQRIS 770>NP_001012661 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GAQRKRIS 9 GAQ +R+S Sbjct: 41 GAQSRRVS 48>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TGAQRKRIS 9 TG RKR S Sbjct: 401 TGGNRKRSS 409>XP_006717694 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 762 SGGQKQRIS 770>XP_006717693 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TGAQRKRIS 9 +G Q++RIS Sbjct: 530 SGGQKQRIS 538>XP_005245608 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TGAQRKRI 8 TG RKR+ Sbjct: 5 TGGSRKRL 12>NP_997234 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GAQRKRI 8 GAQR+R+ Sbjct: 104 GAQRERL 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.123 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,312 Number of extensions: 998 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |