Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_065949 17 2528 XP_006719586 17 2528 NP_689472 17 3301 NP_001186208 17 4312 NP_004189 17 4312 NP_003748 17 4312 NP_006065 16 5631 NP_001186502 16 5631 XP_005250861 16 7355 XP_005248910 16 7355 XP_005248908 16 7355 XP_006715060 16 7355 XP_005248909 16 7355 XP_005248907 16 7355 NP_001139124 16 7355 NP_620172 16 7355 NP_001186491 15 9605 NP_003551 15 9605 NP_001004426 15 9605 NP_001180214 15 9605 NP_057623 15 9605 NP_003782 15 9605 NP_079265 15 9605 NP_116279 15 9605 NP_001035100 15 9605 NP_004902 15 9605 XP_006724395 15 9605 XP_005261823 15 9605 XP_005261822 15 9605 XP_005261821 15 9605 XP_005259634 15 9605 XP_005259632 15 9605 XP_006722830 15 9605 XP_005257805 15 9605 XP_006722205 15 9605 XP_006722204 15 9605 XP_006721061 15 9605 XP_005267641 15 9605 XP_005252039 15 9605 XP_006716248 15 9605 XP_005246923 15 9605 XP_006711658 15 9605 XP_005273393 15 9605 XP_006711657 15 9605 XP_006711656 15 9605 XP_005273392 15 9605 XP_006711655 15 9605 XP_006710064 15 9605 NP_003623 15 9605 NP_001012993 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRSSRPMD 9 TFRSSR MD Sbjct: 137 TFRSSRLMD 145>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRSSRPMD 9 TFRSSR MD Sbjct: 137 TFRSSRLMD 145>NP_065949 Length = 691 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR RPMD Sbjct: 118 FREPRPMD 125>XP_006719586 Length = 657 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR RPMD Sbjct: 118 FREPRPMD 125>NP_689472 Length = 1910 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TFRSSRPMD 9 T RSS+P D Sbjct: 626 TLRSSKPKD 634>NP_001186208 Length = 479 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FRSSRPMD 9 F+SS PMD Sbjct: 139 FKSSCPMD 146>NP_004189 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FRSSRPMD 9 F+SS PMD Sbjct: 154 FKSSCPMD 161>NP_003748 Length = 325 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TFRSSRPMD 9 TFR+ RP++ Sbjct: 225 TFRTERPVN 233>NP_006065 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRSSRPMD 9 TF++S P D Sbjct: 330 TFKNSNPCD 338>NP_001186502 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRSSRPMD 9 TF++S P D Sbjct: 326 TFKNSNPCD 334>XP_005250861 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRSSRPM 8 F+SSRP+ Sbjct: 299 FKSSRPI 305>XP_005248910 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>XP_005248908 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>XP_006715060 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>XP_005248909 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>XP_005248907 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>NP_001139124 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TFRSSR 6 TFRSSR Sbjct: 194 TFRSSR 199>NP_620172 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FRSSRPM 8 F+SSRP+ Sbjct: 308 FKSSRPI 314>NP_001186491 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 495 FRGSRPYE 502>NP_003551 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 549 FRGSRPYE 556>NP_001004426 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 495 FRGSRPYE 502>NP_001180214 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRSSRP 7 TF S+RP Sbjct: 85 TFESARP 91>NP_057623 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRSSRP 7 TF S+RP Sbjct: 85 TFESARP 91>NP_003782 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FRSSRP 7 FRS+RP Sbjct: 965 FRSNRP 970>NP_079265 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TFRSSRPMD 9 TF++S+P++ Sbjct: 772 TFKNSQPVN 780>NP_116279 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 755 FRSSHPFE 762>NP_001035100 Length = 235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FRS RP+ Sbjct: 139 FRSPRPL 145>NP_004902 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FRSSRPMD 9 FR RP D Sbjct: 258 FRKGRPYD 265>XP_006724395 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 549 FRGSRPYE 556>XP_005261823 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 549 FRGSRPYE 556>XP_005261822 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 549 FRGSRPYE 556>XP_005261821 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FR SRP + Sbjct: 549 FRGSRPYE 556>XP_005259634 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRSSRP 7 TF S+RP Sbjct: 85 TFESARP 91>XP_005259632 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRSSRP 7 TF S+RP Sbjct: 13 TFESARP 19>XP_006722830 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TFRSSRP 7 TF S+RP Sbjct: 61 TFESARP 67>XP_005257805 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FR+ RPM Sbjct: 1149 FRTPRPM 1155>XP_006722205 Length = 1384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FR+ RPM Sbjct: 1225 FRTPRPM 1231>XP_006722204 Length = 1384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FR+ RPM Sbjct: 1225 FRTPRPM 1231>XP_006721061 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSRPMD 9 SSRP+D Sbjct: 6 SSRPLD 11>XP_005267641 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RSSRPMD 9 +SSRP D Sbjct: 196 KSSRPFD 202>XP_005252039 Length = 139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FRS RP+ Sbjct: 43 FRSPRPL 49>XP_006716248 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FRSSRPMD 9 FR RP D Sbjct: 258 FRKGRPYD 265>XP_005246923 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 TFRSSRPMD 9 TF++S+P++ Sbjct: 598 TFKNSQPVN 606>XP_006711658 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 466 FRSSHPFE 473>XP_005273393 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 561 FRSSHPFE 568>XP_006711657 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 561 FRSSHPFE 568>XP_006711656 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 755 FRSSHPFE 762>XP_005273392 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 755 FRSSHPFE 762>XP_006711655 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRSSRPMD 9 FRSS P + Sbjct: 755 FRSSHPFE 762>XP_006710064 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SSRPMD 9 SSRP+D Sbjct: 6 SSRPLD 11>NP_003623 Length = 1384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FRSSRPM 8 FR+ RPM Sbjct: 1225 FRTPRPM 1231>NP_001012993 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RSSRPMD 9 +SSRP D Sbjct: 168 KSSRPFD 174Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.128 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 623,032 Number of extensions: 952 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |