Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_056493 17 2528 XP_006719869 17 2528 XP_006719868 17 2528 XP_005266409 17 2528 XP_005266408 17 2528 XP_005266407 17 2528 XP_005266403 17 2528 XP_006719867 17 2528 XP_006719866 17 2528 XP_005266405 17 2528 XP_005266404 17 2528 NP_005850 17 4312 NP_060043 16 5631 XP_006722836 16 5631 XP_006722835 16 5631 XP_005259642 16 5631 XP_006722834 16 5631 XP_005259640 16 5631 NP_005804 16 7355 NP_001243239 16 7355 NP_055720 16 7355 NP_002733 16 7355 NP_001073351 16 7355 NP_001073350 16 7355 NP_001073349 16 7355 NP_057541 16 7355 XP_005258773 16 7355 XP_005267916 16 7355 XP_005246524 16 7355 XP_006712499 16 7355 XP_006712498 16 7355 XP_006712043 16 7355 XP_006712042 16 7355 XP_006712041 16 7355 XP_005264295 16 7355 XP_005264294 16 7355 NP_009052 15 9605 NP_056112 15 9605 NP_443109 15 9605 NP_000520 15 9605 NP_963836 15 9605 XP_005251477 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 211 TFRHSVVVP 219>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 172 TFRHSVVVP 180>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 211 TFRHSVVVP 219>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 211 TFRHSVVVP 219>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 172 TFRHSVVVP 180>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 172 TFRHSVVVP 180>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 172 TFRHSVVVP 180>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 211 TFRHSVVVP 219>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 172 TFRHSVVVP 180>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 79 TFRHSVVVP 87>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 79 TFRHSVVVP 87>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 79 TFRHSVVVP 87>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 52 TFRHSVVVP 60>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 52 TFRHSVVVP 60>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 TFR SVVVP Sbjct: 52 TFRHSVVVP 60>NP_056493 Length = 2946 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>XP_006719869 Length = 2943 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1783 SFDRSVVVP 1791>XP_006719868 Length = 2938 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1783 SFDRSVVVP 1791>XP_005266409 Length = 1430 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 249 SFDRSVVVP 257>XP_005266408 Length = 1934 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>XP_005266407 Length = 2641 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1460 SFDRSVVVP 1468>XP_005266403 Length = 2941 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>XP_006719867 Length = 2961 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>XP_006719866 Length = 2962 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>XP_005266405 Length = 2964 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1783 SFDRSVVVP 1791>XP_005266404 Length = 2967 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TFRRSVVVP 9 +F RSVVVP Sbjct: 1786 SFDRSVVVP 1794>NP_005850 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRRSVVVP 9 T+R S+ VP Sbjct: 252 TYRNSITVP 260>NP_060043 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>XP_006722836 Length = 510 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>XP_006722835 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>XP_005259642 Length = 617 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>XP_006722834 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>XP_005259640 Length = 746 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRSVVVP 9 +RSVVVP Sbjct: 112 KRSVVVP 118>NP_005804 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 731 SFRRSVV 737>NP_001243239 Length = 598 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FRR V+P Sbjct: 215 FRRKFVIP 222>NP_055720 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FRR V+P Sbjct: 215 FRRKFVIP 222>NP_002733 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 738 SFRRSVV 744>NP_001073351 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 549 SFRRSVV 555>NP_001073350 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 706 SFRRSVV 712>NP_001073349 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 706 SFRRSVV 712>NP_057541 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 706 SFRRSVV 712>XP_005258773 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 549 SFRRSVV 555>XP_005267916 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 746 SFRRSVV 752>XP_005246524 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FRR V+P Sbjct: 215 FRRKFVIP 222>XP_006712499 Length = 604 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FRR V+P Sbjct: 215 FRRKFVIP 222>XP_006712498 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FRR V+P Sbjct: 215 FRRKFVIP 222>XP_006712043 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 472 SFRRSVV 478>XP_006712042 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 558 SFRRSVV 564>XP_006712041 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 558 SFRRSVV 564>XP_005264295 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 627 SFRRSVV 633>XP_005264294 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TFRRSVV 7 +FRRSVV Sbjct: 731 SFRRSVV 737>NP_009052 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FRRSVV 7 FRRSVV Sbjct: 111 FRRSVV 116>NP_056112 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRRSVVVP 9 TF+R V+P Sbjct: 206 TFQRCKVIP 214>NP_443109 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FR V++P Sbjct: 71 FRNQVIIP 78>NP_000520 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TFRRSVVV 8 T RR+VVV Sbjct: 143 TMRRTVVV 150>NP_963836 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRRSVVVP 9 FR V++P Sbjct: 71 FRNQVIIP 78>XP_005251477 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRRSVVVP 9 TF+R V+P Sbjct: 206 TFQRCKVIP 214Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.142 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,228 Number of extensions: 523 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |