Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 299 NP_001263689 20 299 NP_001119584 20 299 NP_001119586 20 299 NP_001263625 20 299 NP_001119590 20 299 NP_001263690 20 299 NP_001119585 20 299 NP_001263624 20 299 NP_001119588 20 299 NP_001119587 20 299 NP_001119589 20 299 NP_001263627 20 299 NP_001263628 20 299 NP_001263626 20 299 NP_001091884 17 4312 NP_940886 17 4312 XP_005265137 17 4312 XP_006713177 17 4312 XP_005265136 17 4312 XP_005258399 16 5631 NP_000825 16 7355 NP_001164982 16 7355 NP_001161846 16 7355 NP_001161849 16 7355 NP_001161848 16 7355 NP_001239257 16 7355 NP_055624 16 7355 NP_001161847 16 7355 XP_006715351 16 7355 XP_006715350 16 7355 XP_006715349 16 7355 XP_005249561 16 7355 NP_001107854 15 9605 NP_001121636 15 9605 NP_000323 15 9605 NP_001070651 15 9605 NP_000539 15 9605 NP_063968 15 9605 NP_001112 15 9605 NP_058432 15 9605 NP_001186978 15 9605 NP_000732 15 9605 NP_001121902 15 9605 NP_001121901 15 9605 NP_644807 15 9605 NP_005579 15 9605 NP_064544 15 9605 NP_001361 15 9605 NP_001241878 15 9605 XP_005255589 15 9605 XP_005255588 15 9605 XP_005255587 15 9605 XP_005255586 15 9605 XP_005255585 15 9605 XP_005255584 15 9605 XP_005254927 15 9605 XP_005269592 15 9605 XP_006717692 15 9605 XP_006717691 15 9605 XP_005269591 15 9605 XP_006717690 15 9605 XP_005269590 15 9605 XP_006717689 15 9605 XP_005269588 15 9605 XP_005269587 15 9605 XP_005269586 15 9605 XP_006714339 15 9605 XP_006714338 15 9605 XP_006712019 15 9605 NP_694585 15 9605>NP_000537 Length = 393 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 211 TFRHSVVVP 219>NP_001263689 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 172 TFRHSVVVP 180>NP_001119584 Length = 393 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 211 TFRHSVVVP 219>NP_001119586 Length = 341 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 211 TFRHSVVVP 219>NP_001263625 Length = 302 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 172 TFRHSVVVP 180>NP_001119590 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 172 TFRHSVVVP 180>NP_001263690 Length = 354 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 172 TFRHSVVVP 180>NP_001119585 Length = 346 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 211 TFRHSVVVP 219>NP_001263624 Length = 307 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 172 TFRHSVVVP 180>NP_001119588 Length = 209 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 79 TFRHSVVVP 87>NP_001119587 Length = 261 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 79 TFRHSVVVP 87>NP_001119589 Length = 214 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 79 TFRHSVVVP 87>NP_001263627 Length = 182 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 52 TFRHSVVVP 60>NP_001263628 Length = 187 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 52 TFRHSVVVP 60>NP_001263626 Length = 234 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TFRHIVVVP 9 TFRH VVVP Sbjct: 52 TFRHSVVVP 60>NP_001091884 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 TF H V++P Sbjct: 385 TFPHAVLIP 393>NP_940886 Length = 439 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 TF H V++P Sbjct: 385 TFPHAVLIP 393>XP_005265137 Length = 404 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 TF H V++P Sbjct: 350 TFPHAVLIP 358>XP_006713177 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 TF H V++P Sbjct: 377 TFPHAVLIP 385>XP_005265136 Length = 431 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 TF H V++P Sbjct: 377 TFPHAVLIP 385>XP_005258399 Length = 193 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 TFRHIVVVP 9 + RH V++P Sbjct: 185 SLRHCVIIP 193>NP_000825 Length = 1484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H+ VVP Sbjct: 59 FHHLSVVP 66>NP_001164982 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TFRHIV 6 TFRHI+ Sbjct: 29 TFRHIM 34>NP_001161846 Length = 1063 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 717 RHVLVLP 723>NP_001161849 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 726 RHVLVLP 732>NP_001161848 Length = 1027 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 681 RHVLVLP 687>NP_001239257 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 137 RHVLVLP 143>NP_055624 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 726 RHVLVLP 732>NP_001161847 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 726 RHVLVLP 732>XP_006715351 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 574 RHVLVLP 580>XP_006715350 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 788 RHVLVLP 794>XP_006715349 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 755 RHVLVLP 761>XP_005249561 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RHIVVVP 9 RH++V+P Sbjct: 788 RHVLVLP 794>NP_001107854 Length = 1784 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1645 FVHVIVTP 1652>NP_001121636 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHIVVVP 9 RH+VV P Sbjct: 359 RHVVVHP 365>NP_000323 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RHIVVVP 9 RH+VV P Sbjct: 359 RHVVVHP 365>NP_001070651 Length = 1740 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1601 FVHVIVTP 1608>NP_000539 Length = 1807 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1668 FVHVIVTP 1675>NP_063968 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>NP_001112 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>NP_058432 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>NP_001186978 Length = 2715 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FRHIVVV 8 F+H+V+V Sbjct: 1151 FKHMVIV 1157>NP_000732 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 TFRHIVV 7 TFRH+++ Sbjct: 463 TFRHLLL 469>NP_001121902 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 548 HLIVVP 553>NP_001121901 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 548 HLIVVP 553>NP_644807 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FRHIVV 7 +RHIVV Sbjct: 539 YRHIVV 544>NP_005579 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 FRHIVVVP 9 F HI VP Sbjct: 16 FAHIAAVP 23>NP_064544 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 548 HLIVVP 553>NP_001361 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TFRHI 5 TFRHI Sbjct: 52 TFRHI 56>NP_001241878 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 118 HLIVVP 123>XP_005255589 Length = 1831 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1692 FVHVIVTP 1699>XP_005255588 Length = 1832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1693 FVHVIVTP 1700>XP_005255587 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1715 FVHVIVTP 1722>XP_005255586 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1716 FVHVIVTP 1723>XP_005255585 Length = 1875 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1736 FVHVIVTP 1743>XP_005255584 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FRHIVVVP 9 F H++V P Sbjct: 1759 FVHVIVTP 1766>XP_005254927 Length = 165 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 TFRHIVV 7 TF H+V+ Sbjct: 118 TFNHLVI 124>XP_005269592 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 93 HIIIIP 98>XP_006717692 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 93 HIIIIP 98>XP_006717691 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_005269591 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_006717690 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_005269590 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_006717689 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_005269588 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_005269587 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_005269586 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 3/6 (50%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 HI+++P Sbjct: 171 HIIIIP 176>XP_006714339 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 315 HLIVVP 320>XP_006714338 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 HIVVVP 9 H++VVP Sbjct: 518 HLIVVP 523>XP_006712019 Length = 4158 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 TFRHI 5 TFRHI Sbjct: 52 TFRHI 56>NP_694585 Length = 178 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 TFRHIVV 7 TF H+V+ Sbjct: 118 TFNHLVI 124Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.153 0.499 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,217 Number of extensions: 985 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |