Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005091                                                              20     299
NP_653080                                                              20     299
XP_005267292                                                           20     299
XP_005267291                                                           20     299
XP_005267290                                                           20     299
NP_055907                                                              18    1135
XP_005255242                                                           18    1135
XP_005255241                                                           18    1135
XP_005255240                                                           18    1135
XP_005255239                                                           18    1135
NP_001164433                                                           17    2528
NP_001546                                                              17    2528
NP_001164432                                                           17    2528
XP_006724819                                                           17    2528
XP_006724818                                                           17    2528
NP_001108206                                                           17    3301
NP_001273763                                                           16    5631
NP_002927                                                              16    5631
NP_001009                                                              16    5631
NP_031370                                                              16    7355
NP_001192225                                                           16    7355
NP_062829                                                              16    7355
XP_006717338                                                           16    7355
XP_006717337                                                           16    7355
XP_006717336                                                           16    7355
XP_006715050                                                           16    7355
XP_006715049                                                           16    7355
XP_006715048                                                           16    7355
XP_006715047                                                           16    7355
NP_008989                                                              16    7355
NP_068586                                                              15    9605
NP_001229757                                                           15    9605
NP_612412                                                              15    9605
NP_002589                                                              15    9605
NP_001186329                                                           15    9605
NP_001259017                                                           15    9605
NP_001186327                                                           15    9605
NP_001186326                                                           15    9605
NP_001186328                                                           15    9605
NP_036356                                                              15    9605
NP_060919                                                              15    9605
NP_001186391                                                           15    9605
NP_001259016                                                           15    9605
NP_689483                                                              15    9605
NP_001098060                                                           15    9605
NP_001098059                                                           15    9605
NP_001098058                                                           15    9605
NP_001098057                                                           15    9605
NP_001243102                                                           15    9605
NP_001243100                                                           15    9605
NP_872321                                                              15    9605
NP_005062                                                              15    9605
NP_149416                                                              15    9605
NP_003420                                                              15    9605
XP_006726294                                                           15    9605
XP_006726293                                                           15    9605
XP_006722940                                                           15    9605
XP_006722939                                                           15    9605
XP_006722907                                                           15    9605
XP_006722906                                                           15    9605
XP_006722905                                                           15    9605
XP_005258125                                                           15    9605
XP_006722234                                                           15    9605
XP_005257980                                                           15    9605
XP_005257979                                                           15    9605
XP_006721783                                                           15    9605
XP_005250751                                                           15    9605
XP_006715561                                                           15    9605
XP_005249324                                                           15    9605
XP_005249323                                                           15    9605
XP_006714291                                                           15    9605
XP_006714290                                                           15    9605
NP_653283                                                              15    9605
NP_001099042                                                           15    9605
NP_005459                                                              15    9605
>NP_005091
          Length = 1782

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TFKKFSTQG 9
           TFKKF TQG
Sbjct: 295 TFKKFFTQG 303
>NP_653080
          Length = 1684

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TFKKFSTQG 9
           TFKKF TQG
Sbjct: 197 TFKKFFTQG 205
>XP_005267292
          Length = 1677

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TFKKFSTQG 9
           TFKKF TQG
Sbjct: 190 TFKKFFTQG 198
>XP_005267291
          Length = 1684

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TFKKFSTQG 9
           TFKKF TQG
Sbjct: 197 TFKKFFTQG 205
>XP_005267290
          Length = 1782

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TFKKFSTQG 9
           TFKKF TQG
Sbjct: 295 TFKKFFTQG 303
>NP_055907
          Length = 3661

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    FKKFSTQG 9
            FKK STQG
Sbjct: 1466 FKKLSTQG 1473
>XP_005255242
          Length = 3609

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    FKKFSTQG 9
            FKK STQG
Sbjct: 1414 FKKLSTQG 1421
>XP_005255241
          Length = 3637

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    FKKFSTQG 9
            FKK STQG
Sbjct: 1414 FKKLSTQG 1421
>XP_005255240
          Length = 3663

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    FKKFSTQG 9
            FKK STQG
Sbjct: 1440 FKKLSTQG 1447
>XP_005255239
          Length = 3689

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    FKKFSTQG 9
            FKK STQG
Sbjct: 1466 FKKLSTQG 1473
>NP_001164433
          Length = 1327

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TFKKFSTQG 9
           TF+KFS  G
Sbjct: 450 TFQKFSVNG 458
>NP_001546
          Length = 1336

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TFKKFSTQG 9
           TF+KFS  G
Sbjct: 459 TFQKFSVNG 467
>NP_001164432
          Length = 1341

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TFKKFSTQG 9
           TF+KFS  G
Sbjct: 459 TFQKFSVNG 467
>XP_006724819
          Length = 1253

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TFKKFSTQG 9
           TF+KFS  G
Sbjct: 459 TFQKFSVNG 467
>XP_006724818
          Length = 1304

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TFKKFSTQG 9
           TF+KFS  G
Sbjct: 459 TFQKFSVNG 467
>NP_001108206
          Length = 428

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  FKKFSTQG 9
          F+KFST G
Sbjct: 85 FRKFSTVG 92
>NP_001273763
          Length = 260

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  FKKFSTQ 8
          FKKF+T+
Sbjct: 32 FKKFATE 38
>NP_002927
          Length = 286

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  FKKFSTQ 8
          FKKF+T+
Sbjct: 58 FKKFATE 64
>NP_001009
          Length = 145

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TFKKFSTQG 9
          TF+KF+ +G
Sbjct: 11 TFRKFTYRG 19
>NP_031370
          Length = 905

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+F  QG
Sbjct: 524 FKEFKAQG 531
>NP_001192225
          Length = 390

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  FKKFSTQG 9
          FK+F  QG
Sbjct: 9  FKEFKAQG 16
>NP_062829
          Length = 173

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+F T G
Sbjct: 114 FKEFDTNG 121
>XP_006717338
          Length = 868

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+F  QG
Sbjct: 487 FKEFKAQG 494
>XP_006717337
          Length = 876

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+F  QG
Sbjct: 495 FKEFKAQG 502
>XP_006717336
          Length = 932

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+F  QG
Sbjct: 551 FKEFKAQG 558
>XP_006715050
          Length = 650

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 603 FKSFKTKG 610
>XP_006715049
          Length = 715

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 578 FKSFKTKG 585
>XP_006715048
          Length = 724

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 603 FKSFKTKG 610
>XP_006715047
          Length = 740

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 603 FKSFKTKG 610
>NP_008989
          Length = 739

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 602 FKSFKTKG 609
>NP_068586
          Length = 299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   FKKFSTQG 9
           +KK+ TQG
Sbjct: 198 WKKYITQG 205
>NP_001229757
          Length = 326

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   FKKFSTQG 9
           +KK+ TQG
Sbjct: 225 WKKYITQG 232
>NP_612412
          Length = 226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK F T+G
Sbjct: 163 FKVFDTEG 170
>NP_002589
          Length = 344

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           F+KF TQ
Sbjct: 241 FQKFKTQ 247
>NP_001186329
          Length = 1214

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_001259017
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>NP_001186327
          Length = 1242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_001186326
          Length = 1286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_001186328
          Length = 1189

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_036356
          Length = 1258

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_060919
          Length = 1119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   KFSTQG 9
           +FSTQG
Sbjct: 185 RFSTQG 190
>NP_001186391
          Length = 311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           F+KF TQ
Sbjct: 208 FQKFKTQ 214
>NP_001259016
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>NP_689483
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>NP_001098060
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>NP_001098059
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>NP_001098058
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>NP_001098057
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>NP_001243102
          Length = 531

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 202 TFNRFST 208
>NP_001243100
          Length = 625

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 296 TFNRFST 302
>NP_872321
          Length = 555

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   FKKFST 7
           FK+FST
Sbjct: 182 FKRFST 187
>NP_005062
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>NP_149416
          Length = 354

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  TFKKFS 6
          T+KKFS
Sbjct: 23 TYKKFS 28
>NP_003420
          Length = 595

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 266 TFNRFST 272
>XP_006726294
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 296 TFNRFST 302
>XP_006726293
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 296 TFNRFST 302
>XP_006722940
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 296 TFNRFST 302
>XP_006722939
          Length = 597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   TFKKFST 7
           TF +FST
Sbjct: 296 TFNRFST 302
>XP_006722907
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>XP_006722906
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>XP_006722905
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           FK+F TQ
Sbjct: 195 FKQFKTQ 201
>XP_005258125
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>XP_006722234
          Length = 901

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 215 FKQFSTK 221
>XP_005257980
          Length = 897

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 214 FKQFSTK 220
>XP_005257979
          Length = 897

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 214 FKQFSTK 220
>XP_006721783
          Length = 897

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 214 FKQFSTK 220
>XP_005250751
          Length = 147

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  FKKFSTQG 9
          FK F T+G
Sbjct: 84 FKVFDTEG 91
>XP_006715561
          Length = 298

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   FKKFSTQ 8
           F+KF TQ
Sbjct: 241 FQKFKTQ 247
>XP_005249324
          Length = 299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   FKKFSTQG 9
           +KK+ TQG
Sbjct: 198 WKKYITQG 205
>XP_005249323
          Length = 299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   FKKFSTQG 9
           +KK+ TQG
Sbjct: 198 WKKYITQG 205
>XP_006714291
          Length = 1227

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>XP_006714290
          Length = 1269

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   TFKKFSTQ 8
           TF KF +Q
Sbjct: 279 TFSKFGSQ 286
>NP_653283
          Length = 897

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FST+
Sbjct: 214 FKQFSTK 220
>NP_001099042
          Length = 150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   FKKFSTQ 8
           FK+FS+Q
Sbjct: 134 FKQFSSQ 140
>NP_005459
          Length = 740

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   FKKFSTQG 9
           FK+  TQG
Sbjct: 174 FKELQTQG 181
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.319    0.128    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 466,491
Number of extensions: 793
Number of successful extensions: 75
Number of sequences better than 10000.0: 75
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 75
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

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