Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_055309 17 2528 XP_006721103 17 2528 XP_005255314 17 2528 XP_006721102 17 2528 XP_005255313 17 2528 XP_005255312 17 2528 XP_006721101 17 2528 XP_005255311 17 2528 XP_005255310 17 2528 NP_055839 17 3301 NP_000098 17 4312 XP_006718224 17 4312 NP_056417 16 5631 NP_001254507 16 5631 NP_055426 16 7355 NP_056993 16 7355 XP_005248757 16 7355 XP_006715468 16 7355 XP_005248756 16 7355 XP_006715467 16 7355 NP_002215 15 9605 NP_056034 15 9605 NP_001269243 15 9605 NP_001269242 15 9605 NP_001013861 15 9605 NP_001138771 15 9605 NP_001138770 15 9605 NP_001138769 15 9605 XP_006721852 15 9605 XP_006721851 15 9605 XP_006721850 15 9605 XP_006721849 15 9605 XP_006715155 15 9605 XP_006715154 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ESTTRLQE 9 ESTTRLQE Sbjct: 2239 ESTTRLQE 2246>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ESTTRLQE 9 ESTTRLQE Sbjct: 2231 ESTTRLQE 2238>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ESTTRLQE 9 ESTTRLQE Sbjct: 2192 ESTTRLQE 2199>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ESTTRLQE 9 ESTTRLQE Sbjct: 2271 ESTTRLQE 2278>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 ESTTRLQE 9 ESTTRLQE Sbjct: 2284 ESTTRLQE 2291>NP_055309 Length = 1962 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 676 TESTGRLEE 684>XP_006721103 Length = 1597 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 644 TESTGRLEE 652>XP_005255314 Length = 1709 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 423 TESTGRLEE 431>XP_006721102 Length = 1820 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 534 TESTGRLEE 542>XP_005255313 Length = 1822 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 644 TESTGRLEE 652>XP_005255312 Length = 1871 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 644 TESTGRLEE 652>XP_006721101 Length = 1907 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 644 TESTGRLEE 652>XP_005255311 Length = 1913 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 676 TESTGRLEE 684>XP_005255310 Length = 1919 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TEST RL+E Sbjct: 644 TESTGRLEE 652>NP_055839 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 TESTTRLQ 8 T++TTRLQ Sbjct: 22 TDTTTRLQ 29>NP_000098 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 E TTRLQ+ Sbjct: 178 EGTTRLQD 185>XP_006718224 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 E TTRLQ+ Sbjct: 178 EGTTRLQD 185>NP_056417 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 T TTRLQ+ Sbjct: 124 TRRTTRLQQ 132>NP_001254507 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 T TTRLQ+ Sbjct: 124 TRRTTRLQQ 132>NP_055426 Length = 5596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 4382 QSTTRLTE 4389>NP_056993 Length = 2371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TESTTRLQE 9 TE+TT+L + Sbjct: 1027 TEATTKLHD 1035>XP_005248757 Length = 3591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 2377 QSTTRLTE 2384>XP_006715468 Length = 3744 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 2530 QSTTRLTE 2537>XP_005248756 Length = 3905 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 2691 QSTTRLTE 2698>XP_006715467 Length = 5550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 4382 QSTTRLTE 4389>NP_002215 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 1503 QSTTRLLE 1510>NP_056034 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>NP_001269243 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>NP_001269242 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 26 TENLQRLQE 34>NP_001013861 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>NP_001138771 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>NP_001138770 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>NP_001138769 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>XP_006721852 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>XP_006721851 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>XP_006721850 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>XP_006721849 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TESTTRLQE 9 TE+ RLQE Sbjct: 67 TENLQRLQE 75>XP_006715155 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 1532 QSTTRLLE 1539>XP_006715154 Length = 2700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ESTTRLQE 9 +STTRL E Sbjct: 1532 QSTTRLLE 1539Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.101 0.228 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 436,911 Number of extensions: 677 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |