Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 21 229 XP_006714104 21 229 XP_005265800 21 229 XP_006714103 21 229 XP_006714102 21 229 XP_005268838 17 4312 XP_005268836 17 4312 XP_005268834 17 4312 XP_005268833 17 4312 NP_037376 17 4312 NP_000821 16 5631 NP_783300 16 5631 NP_001074003 16 5631 XP_005261001 16 5631 XP_005261000 16 5631 XP_005260999 16 5631 XP_006724054 16 5631 XP_005254452 16 5631 XP_005254451 16 5631 NP_001073864 16 7355 NP_001182760 16 7355 NP_653248 16 7355 NP_001036090 16 7355 NP_004911 16 7355 XP_005257912 16 7355 XP_006722259 16 7355 XP_006722258 16 7355 XP_006722257 16 7355 XP_006722256 16 7355 XP_006714508 16 7355 XP_006714507 16 7355 XP_006710447 16 7355 XP_006710446 16 7355 XP_006710445 16 7355 XP_005270577 16 7355 NP_006243 15 9605 NP_060761 15 9605 NP_001265153 15 9605 NP_065863 15 9605 NP_001106882 15 9605 NP_057107 15 9605 NP_114102 15 9605 NP_001231643 15 9605 XP_005259182 15 9605 XP_005259181 15 9605 XP_005260057 15 9605 XP_006722867 15 9605 XP_006722866 15 9605 XP_006722865 15 9605 XP_005260058 15 9605 XP_006722002 15 9605 XP_006722000 15 9605 XP_006721999 15 9605 XP_006721998 15 9605 XP_006721997 15 9605 XP_006721996 15 9605 XP_006721995 15 9605 XP_005252332 15 9605 XP_005252333 15 9605 NP_057423 15 9605 NP_612423 15 9605 NP_115718 15 9605>NP_006197 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDYLVIMED 9 TDYLVI+ED Sbjct: 134 TDYLVIVED 142>XP_006714104 Length = 832 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDYLVIMED 9 TDYLVI+ED Sbjct: 159 TDYLVIVED 167>XP_005265800 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDYLVIMED 9 TDYLVI+ED Sbjct: 134 TDYLVIVED 142>XP_006714103 Length = 1111 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDYLVIMED 9 TDYLVI+ED Sbjct: 156 TDYLVIVED 164>XP_006714102 Length = 1114 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDYLVIMED 9 TDYLVI+ED Sbjct: 159 TDYLVIVED 167>XP_005268838 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 +DY V++ED Sbjct: 217 SDYYVMLED 225>XP_005268836 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 +DY V++ED Sbjct: 217 SDYYVMLED 225>XP_005268834 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 +DY V++ED Sbjct: 246 SDYYVMLED 254>XP_005268833 Length = 507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 +DY V++ED Sbjct: 246 SDYYVMLED 254>NP_037376 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 +DY V++ED Sbjct: 217 SDYYVMLED 225>NP_000821 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 746 TDYALLME 753>NP_783300 Length = 905 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 731 TDYALLME 738>NP_001074003 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY+ +ME Sbjct: 876 TDYVEVME 883>XP_005261001 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 731 TDYALLME 738>XP_005261000 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 746 TDYALLME 753>XP_005260999 Length = 934 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 731 TDYALLME 738>XP_006724054 Length = 949 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY ++ME Sbjct: 746 TDYALLME 753>XP_005254452 Length = 2188 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY+ +ME Sbjct: 876 TDYVEVME 883>XP_005254451 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TDY+ +ME Sbjct: 876 TDYVEVME 883>NP_001073864 Length = 1374 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 196 TPYLLVME 203>NP_001182760 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 TDY+ IM++ Sbjct: 1161 TDYVRIMQE 1169>NP_653248 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DYLVIME 8 DY V+ME Sbjct: 70 DYAVVME 76>NP_001036090 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DYLVIME 8 DY V+ME Sbjct: 70 DYAVVME 76>NP_004911 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 93 TPYLLVME 100>XP_005257912 Length = 915 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 196 TPYLLVME 203>XP_006722259 Length = 1326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 148 TPYLLVME 155>XP_006722258 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 29 TPYLLVME 36>XP_006722257 Length = 1324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 196 TPYLLVME 203>XP_006722256 Length = 1326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 T YL++ME Sbjct: 148 TPYLLVME 155>XP_006714508 Length = 199 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DYLVIME 8 DY V+ME Sbjct: 87 DYAVVME 93>XP_006714507 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DYLVIME 8 DY V+ME Sbjct: 87 DYAVVME 93>XP_006710447 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 TDY+ IM++ Sbjct: 1070 TDYVRIMQE 1078>XP_006710446 Length = 1239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 TDY+ IM++ Sbjct: 1117 TDYVRIMQE 1125>XP_006710445 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 TDY+ IM++ Sbjct: 1128 TDYVRIMQE 1136>XP_005270577 Length = 1250 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDYLVIMED 9 TDY+ IM++ Sbjct: 1128 TDYVRIMQE 1136>NP_006243 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 TDYLVIME 8 TD+ ++ME Sbjct: 87 TDFFMVME 94>NP_060761 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DYLVIMED 9 +YL IM D Sbjct: 543 EYLAIMND 550>NP_001265153 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DYLVIMED 9 +YL IM D Sbjct: 244 EYLAIMND 251>NP_065863 Length = 2047 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 1629 EYLALLED 1636>NP_001106882 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DYLVIMED 9 +YL IM D Sbjct: 567 EYLAIMND 574>NP_057107 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YLVIME 8 YLV+ME Sbjct: 27 YLVVME 32>NP_114102 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDYLVIMED 9 TDY + ME+ Sbjct: 30 TDYWLYMEE 38>NP_001231643 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DYLVIMED 9 +YL IM D Sbjct: 455 EYLAIMND 462>XP_005259182 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDYLVIMED 9 TDY + ME+ Sbjct: 30 TDYWLYMEE 38>XP_005259181 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDYLVIMED 9 TDY + ME+ Sbjct: 30 TDYWLYMEE 38>XP_005260057 Length = 2113 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 1695 EYLALLED 1702>XP_006722867 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 741 EYLALLED 748>XP_006722866 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 1360 EYLALLED 1367>XP_006722865 Length = 2078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 1660 EYLALLED 1667>XP_005260058 Length = 2082 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 DYLVIMED 9 +YL ++ED Sbjct: 1664 EYLALLED 1671>XP_006722002 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 248 YLLIMKD 254>XP_006722000 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 42 YLLIMKD 48>XP_006721999 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 79 YLLIMKD 85>XP_006721998 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 79 YLLIMKD 85>XP_006721997 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 79 YLLIMKD 85>XP_006721996 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 97 YLLIMKD 103>XP_006721995 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 248 YLLIMKD 254>XP_005252332 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DYLVIMED 9 DY++++ED Sbjct: 205 DYVLMVED 212>XP_005252333 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DYLVIMED 9 DY++++ED Sbjct: 205 DYVLMVED 212>NP_057423 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YLVIMED 9 YL+IM+D Sbjct: 42 YLLIMKD 48>NP_612423 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DYLVIMED 9 DY V+ ED Sbjct: 259 DYSVLFED 266>NP_115718 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DYLVIMED 9 DY++++ED Sbjct: 205 DYVLMVED 212Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.144 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 462,756 Number of extensions: 922 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |