Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 869 XP_005266703 19 869 NP_001171835 17 2528 NP_116264 17 2528 XP_005257804 17 2528 XP_005257803 17 2528 XP_005276377 17 3301 NP_001229326 17 4312 NP_002813 17 4312 NP_003418 17 4312 XP_005249427 17 4312 XP_005249426 17 4312 XP_005249421 17 4312 NP_001243779 16 5631 NP_596869 16 5631 XP_006712787 16 5631 XP_006712786 16 5631 NP_064446 16 5631 NP_001254479 16 5631 NP_612468 16 7355 NP_056520 15 9605 NP_064425 15 9605 NP_001001290 15 9605 NP_004298 15 9605 NP_775098 15 9605 NP_001159522 15 9605 NP_037528 15 9605 NP_001269970 15 9605 NP_001269971 15 9605 NP_079514 15 9605 NP_001011885 15 9605 XP_005261636 15 9605 XP_005261634 15 9605 XP_005261632 15 9605 XP_005261631 15 9605 XP_005261630 15 9605 XP_005261629 15 9605 XP_005261006 15 9605 XP_006724055 15 9605 XP_006720636 15 9605 XP_005248158 15 9605 XP_006714075 15 9605 XP_006714074 15 9605 XP_006714073 15 9605 XP_006714072 15 9605 XP_006714071 15 9605 XP_006714070 15 9605 XP_006714069 15 9605 XP_006714068 15 9605 XP_006714032 15 9605 XP_006714031 15 9605>NP_443179 Length = 2170 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 TDVGI TLA Sbjct: 2089 TDVGIATLA 2097>XP_005266703 Length = 1501 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 TDVGI TLA Sbjct: 1420 TDVGIATLA 1428>NP_001171835 Length = 404 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TDVGIETLA 9 TDVG TLA Sbjct: 255 TDVGFTTLA 263>NP_116264 Length = 436 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TDVGIETLA 9 TDVG TLA Sbjct: 287 TDVGFTTLA 295>XP_005257804 Length = 406 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TDVGIETLA 9 TDVG TLA Sbjct: 257 TDVGFTTLA 265>XP_005257803 Length = 438 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 TDVGIETLA 9 TDVG TLA Sbjct: 289 TDVGFTTLA 297>XP_005276377 Length = 328 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TDVGIET 7 TD+G+ET Sbjct: 23 TDIGLET 29>NP_001229326 Length = 357 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TDVGIET 7 TDVG++T Sbjct: 171 TDVGVDT 177>NP_002813 Length = 350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TDVGIET 7 TDVG++T Sbjct: 164 TDVGVDT 170>NP_003418 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 T+VG+E LA Sbjct: 115 TEVGLEDLA 123>XP_005249427 Length = 515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 T+VG+E LA Sbjct: 115 TEVGLEDLA 123>XP_005249426 Length = 515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 T+VG+E LA Sbjct: 115 TEVGLEDLA 123>XP_005249421 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 T+VG+E LA Sbjct: 115 TEVGLEDLA 123>NP_001243779 Length = 34350 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVGIE 6 TDVGIE Sbjct: 5287 TDVGIE 5292>NP_596869 Length = 33423 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVGIE 6 TDVGIE Sbjct: 4360 TDVGIE 4365>XP_006712787 Length = 33978 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVGIE 6 TDVGIE Sbjct: 5288 TDVGIE 5293>XP_006712786 Length = 35484 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVGIE 6 TDVGIE Sbjct: 5288 TDVGIE 5293>NP_064446 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DVGIETL 8 DVG++TL Sbjct: 247 DVGVDTL 253>NP_001254479 Length = 35991 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVGIE 6 TDVGIE Sbjct: 5604 TDVGIE 5609>NP_612468 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDVGIETLA 9 TD+ ++TLA Sbjct: 219 TDLDVDTLA 227>NP_056520 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 362 TDVAVET 368>NP_064425 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GIETLA 9 GIETLA Sbjct: 362 GIETLA 367>NP_001001290 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GIETLA 9 GIETLA Sbjct: 333 GIETLA 338>NP_004298 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_775098 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_001159522 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>NP_037528 Length = 1055 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VGIETL 8 VGIETL Sbjct: 676 VGIETL 681>NP_001269970 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VGIETL 8 VGIETL Sbjct: 676 VGIETL 681>NP_001269971 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VGIETL 8 VGIETL Sbjct: 676 VGIETL 681>NP_079514 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDVGIETL 8 TD+ I+TL Sbjct: 217 TDIDIDTL 224>NP_001011885 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDVGIETL 8 TD+ I+TL Sbjct: 217 TDIDIDTL 224>XP_005261636 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 295 TDVAVET 301>XP_005261634 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 362 TDVAVET 368>XP_005261632 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 295 TDVAVET 301>XP_005261631 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 362 TDVAVET 368>XP_005261630 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 362 TDVAVET 368>XP_005261629 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TDVGIET 7 TDV +ET Sbjct: 362 TDVAVET 368>XP_005261006 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VGIETL 8 VGIETL Sbjct: 272 VGIETL 277>XP_006724055 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VGIETL 8 VGIETL Sbjct: 377 VGIETL 382>XP_006720636 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDVGIETL 8 TD+ I+TL Sbjct: 217 TDIDIDTL 224>XP_005248158 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714075 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714074 Length = 740 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714073 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714072 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714071 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714070 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714069 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714068 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVGIETLA 9 D G++TLA Sbjct: 8 DSGVDTLA 15>XP_006714032 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GIETLA 9 GIETLA Sbjct: 333 GIETLA 338>XP_006714031 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GIETLA 9 GIETLA Sbjct: 362 GIETLA 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.132 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,061 Number of extensions: 501 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |