Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 21 229 XP_005250103 21 229 XP_005250102 21 229 NP_001172048 18 1482 NP_001172047 18 1482 NP_061127 18 1482 XP_005247681 18 1482 XP_005247679 18 1482 XP_005247678 18 1482 NP_002289 18 1935 XP_005266431 18 1935 NP_000436 17 4312 NP_958780 17 4312 NP_958781 17 4312 NP_958785 17 4312 NP_958783 17 4312 NP_958786 17 4312 NP_079052 17 4312 NP_958782 17 4312 NP_958784 17 4312 XP_005254732 17 4312 XP_005254731 17 4312 XP_006720754 17 4312 XP_005254729 17 4312 XP_005254730 17 4312 XP_005254728 17 4312 XP_005254727 17 4312 XP_006716654 17 4312 XP_005251041 17 4312 XP_005251040 17 4312 XP_006716653 17 4312 XP_006716652 17 4312 XP_005251039 17 4312 XP_005251038 17 4312 XP_005251036 17 4312 XP_005251037 17 4312 XP_005251035 17 4312 XP_006716651 17 4312 XP_005251034 17 4312 XP_005251033 17 4312 NP_078966 16 5631 NP_001121167 16 5631 NP_001161066 16 5631 NP_071353 16 5631 NP_065875 16 5631 NP_000299 16 5631 XP_005257627 16 5631 XP_005252604 16 5631 XP_005252603 16 5631 XP_005252601 16 5631 XP_006717551 16 5631 XP_005252600 16 5631 XP_005252599 16 5631 XP_006717550 16 5631 NP_071351 16 7355 NP_056210 16 7355 NP_620144 16 7355 NP_001076088 16 7355 XP_005271460 16 7355 XP_005250310 16 7355 NP_001278296 15 9605 NP_001278295 15 9605 NP_057608 15 9605 XP_006721116 15 9605 XP_005255419 15 9605 XP_005255418 15 9605 XP_005246846 15 9605 NP_004578 15 9605 NP_001036041 15 9605 NP_963868 15 9605 NP_113642 15 9605>NP_004324 Length = 766 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDVAQSNPK 9 TDVA+SNPK Sbjct: 142 TDVARSNPK 150>XP_005250103 Length = 758 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDVAQSNPK 9 TDVA+SNPK Sbjct: 142 TDVARSNPK 150>XP_005250102 Length = 767 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDVAQSNPK 9 TDVA+SNPK Sbjct: 142 TDVARSNPK 150>NP_001172048 Length = 581 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 160 TDLIQANPK 168>NP_001172047 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 160 TDLIQANPK 168>NP_061127 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 160 TDLIQANPK 168>XP_005247681 Length = 496 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 46 TDLIQANPK 54>XP_005247679 Length = 528 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 78 TDLIQANPK 86>XP_005247678 Length = 582 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+ Q+NPK Sbjct: 160 TDLIQANPK 168>NP_002289 Length = 627 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TDVAQSNPK 9 TDV + NPK Sbjct: 353 TDVVRGNPK 361>XP_005266431 Length = 627 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TDVAQSNPK 9 TDV + NPK Sbjct: 353 TDVVRGNPK 361>NP_000436 Length = 4574 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 151 DIADGNPK 158>NP_958780 Length = 4533 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 110 DIADGNPK 117>NP_958781 Length = 4525 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 102 DIADGNPK 109>NP_958785 Length = 4551 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 128 DIADGNPK 135>NP_958783 Length = 4515 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 92 DIADGNPK 99>NP_958786 Length = 4547 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 124 DIADGNPK 131>NP_079052 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>NP_958782 Length = 4684 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 261 DIADGNPK 268>NP_958784 Length = 4547 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 124 DIADGNPK 131>XP_005254732 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_005254731 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_006720754 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_005254729 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_005254730 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_005254728 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_005254727 Length = 1746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DVA+S PK Sbjct: 804 DVAKSTPK 811>XP_006716654 Length = 3562 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 266 DIADGNPK 273>XP_005251041 Length = 4520 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 97 DIADGNPK 104>XP_005251040 Length = 4524 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 101 DIADGNPK 108>XP_006716653 Length = 4529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 106 DIADGNPK 113>XP_006716652 Length = 4529 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 106 DIADGNPK 113>XP_005251039 Length = 4530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 107 DIADGNPK 114>XP_005251038 Length = 4538 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 115 DIADGNPK 122>XP_005251036 Length = 4552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 129 DIADGNPK 136>XP_005251037 Length = 4552 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 129 DIADGNPK 136>XP_005251035 Length = 4556 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 133 DIADGNPK 140>XP_006716651 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 156 DIADGNPK 163>XP_005251034 Length = 4685 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 266 DIADGNPK 273>XP_005251033 Length = 4689 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DVAQSNPK 9 D+A NPK Sbjct: 266 DIADGNPK 273>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DVAQSNP 8 DV+Q+NP Sbjct: 4730 DVSQTNP 4736>NP_001121167 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 T+VAQSN Sbjct: 147 TEVAQSN 153>NP_001161066 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 T+VAQSN Sbjct: 148 TEVAQSN 154>NP_071353 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TDVAQSNPK 9 +D+AQS+P+ Sbjct: 172 SDLAQSDPE 180>NP_065875 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>NP_000299 Length = 498 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 T+VAQSN Sbjct: 165 TEVAQSN 171>XP_005257627 Length = 1013 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 TDVAQSNPK 9 +D+AQS+P+ Sbjct: 4 SDLAQSDPE 12>XP_005252604 Length = 1386 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>XP_005252603 Length = 1457 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>XP_005252601 Length = 1948 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 245 TDVAKSN 251>XP_006717551 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>XP_005252600 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>XP_005252599 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>XP_006717550 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDVAQSN 7 TDVA+SN Sbjct: 255 TDVAKSN 261>NP_071351 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 + AQSNP+ Sbjct: 151 EAAQSNPE 158>NP_056210 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DV+ SNP+ Sbjct: 225 DVSHSNPE 232>NP_620144 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVAQSNPK 9 D+AQS+P+ Sbjct: 21 DLAQSDPE 28>NP_001076088 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVAQSNPK 9 D+AQS+P+ Sbjct: 21 DLAQSDPE 28>XP_005271460 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DVAQSNPK 9 D+AQS+P+ Sbjct: 21 DLAQSDPE 28>XP_005250310 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DVAQSNPK 9 DV+ SNP+ Sbjct: 225 DVSHSNPE 232>NP_001278296 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDVAQSNP 8 TDVA S P Sbjct: 303 TDVAVSTP 310>NP_001278295 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDVAQSNP 8 TDVA S P Sbjct: 397 TDVAVSTP 404>NP_057608 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DVAQSNP 8 D+A SNP Sbjct: 223 DMAHSNP 229>XP_006721116 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DVAQSNP 8 D+A SNP Sbjct: 162 DMAHSNP 168>XP_005255419 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DVAQSNP 8 D+A SNP Sbjct: 162 DMAHSNP 168>XP_005255418 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DVAQSNP 8 D+A SNP Sbjct: 223 DMAHSNP 229>XP_005246846 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+A S+P+ Sbjct: 216 TDLALSSPR 224>NP_004578 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVAQS 6 TDVAQS Sbjct: 180 TDVAQS 185>NP_001036041 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDVAQS 6 TDVAQS Sbjct: 180 TDVAQS 185>NP_963868 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDVAQSNPK 9 TD+A S+P+ Sbjct: 216 TDLALSSPR 224>NP_113642 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VAQSNPK 9 +AQSNP+ Sbjct: 509 LAQSNPQ 515Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.109 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 588,025 Number of extensions: 808 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |