Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 299 NP_001035957 20 299 XP_006721990 20 299 XP_006721989 20 299 XP_005258041 20 299 XP_006721988 20 299 XP_006721987 20 299 XP_006721986 20 299 XP_005258040 20 299 XP_006721985 20 299 NP_112586 18 1135 NP_004902 17 4312 XP_006716248 17 4312 NP_001269645 16 5631 NP_036579 16 5631 NP_001269646 16 5631 NP_001269647 16 5631 NP_061146 16 5631 NP_954872 16 5631 NP_872409 16 5631 XP_006718595 16 5631 XP_005250173 16 5631 NP_892006 16 7355 NP_149062 16 7355 NP_065837 16 7355 XP_005256125 16 7355 XP_005256123 16 7355 XP_005256124 16 7355 XP_005256122 16 7355 XP_005256121 16 7355 XP_006715488 16 7355 XP_006715487 16 7355 XP_006715486 16 7355 XP_006715485 16 7355 XP_006715484 16 7355 XP_006715483 16 7355 XP_006715482 16 7355 XP_006715481 16 7355 XP_006715480 16 7355 XP_006715479 16 7355 XP_006715478 16 7355 XP_006715477 16 7355 XP_006715476 16 7355 XP_006715475 16 7355 XP_006715474 16 7355 XP_006715473 16 7355 XP_006715472 16 7355 XP_006715471 16 7355 XP_006715470 16 7355 NP_066964 15 9605 NP_001015887 15 9605 NP_689751 15 9605 XP_006713580 15 9605 XP_006713579 15 9605 XP_005246894 15 9605 XP_005246893 15 9605 NP_008955 15 9605>NP_000258 Length = 2818 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2209 TELAQRFAF 2217>NP_001035957 Length = 2839 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2230 TELAQRFAF 2238>XP_006721990 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2240 TELAQRFAF 2248>XP_006721989 Length = 2823 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2240 TELAQRFAF 2248>XP_005258041 Length = 2836 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2209 TELAQRFAF 2217>XP_006721988 Length = 2846 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2219 TELAQRFAF 2227>XP_006721987 Length = 2849 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2240 TELAQRFAF 2248>XP_006721986 Length = 2854 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2227 TELAQRFAF 2235>XP_005258040 Length = 2857 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2230 TELAQRFAF 2238>XP_006721985 Length = 2867 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TDLAQRFAF 9 T+LAQRFAF Sbjct: 2240 TELAQRFAF 2248>NP_112586 Length = 229 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 TDLAQRFA 8 TDLAQ+FA Sbjct: 160 TDLAQKFA 167>NP_004902 Length = 645 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDLAQRF 7 TDLA+RF Sbjct: 241 TDLAKRF 247>XP_006716248 Length = 646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TDLAQRF 7 TDLA+RF Sbjct: 241 TDLAKRF 247>NP_001269645 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLAQRFA 8 DLA+RFA Sbjct: 959 DLARRFA 965>NP_036579 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLAQRFA 8 DLA+RFA Sbjct: 959 DLARRFA 965>NP_001269646 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLAQRFA 8 DLA+RFA Sbjct: 959 DLARRFA 965>NP_001269647 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLAQRFA 8 DLA+RFA Sbjct: 901 DLARRFA 907>NP_061146 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 DLAQ+F + Sbjct: 235 DLAQKFGY 242>NP_954872 Length = 799 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 DLAQ+F + Sbjct: 235 DLAQKFGY 242>NP_872409 Length = 389 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DLAQRF 7 DLAQRF Sbjct: 206 DLAQRF 211Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDLAQRFA 8 +D+A+RFA Sbjct: 307 SDVAKRFA 314>XP_006718595 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DLAQRF 7 DLAQRF Sbjct: 206 DLAQRF 211Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDLAQRFA 8 +D+A+RFA Sbjct: 307 SDVAKRFA 314>XP_005250173 Length = 1222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 DLAQRFA 8 DLA+RFA Sbjct: 959 DLARRFA 965>NP_892006 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 484 DMAERFHF 491>NP_149062 Length = 8749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>NP_065837 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_005256125 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_005256123 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_005256124 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_005256122 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_005256121 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDLAQR 6 TDLAQR Sbjct: 439 TDLAQR 444>XP_006715488 Length = 8721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715487 Length = 8744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715486 Length = 8758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715485 Length = 8793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715484 Length = 8794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715483 Length = 8795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715482 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 484 DMAERFHF 491>XP_006715481 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 444 DMAERFHF 451>XP_006715480 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715479 Length = 8804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715478 Length = 8809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715477 Length = 8822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 467 DMAERFHF 474>XP_006715476 Length = 8823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715475 Length = 8827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715474 Length = 8829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 474 DMAERFHF 481>XP_006715473 Length = 8832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715472 Length = 8839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 484 DMAERFHF 491>XP_006715471 Length = 8842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>XP_006715470 Length = 8846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLAQRFAF 9 D+A+RF F Sbjct: 491 DMAERFHF 498>NP_066964 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDLAQRFA 8 TDL+ RF+ Sbjct: 136 TDLSSRFS 143>NP_001015887 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDLAQRFAF 9 +DL Q F+F Sbjct: 339 SDLGQSFSF 347>NP_689751 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDLAQRFAF 9 +DL Q F+F Sbjct: 338 SDLGQSFSF 346>XP_006713580 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDLAQRFAF 9 +DL Q F+F Sbjct: 280 SDLGQSFSF 288>XP_006713579 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDLAQRFAF 9 +DL Q F+F Sbjct: 310 SDLGQSFSF 318>XP_005246894 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDLAQRFA 8 TDL+ RF+ Sbjct: 231 TDLSSRFS 238>XP_005246893 Length = 827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TDLAQRFA 8 TDL+ RF+ Sbjct: 231 TDLSSRFS 238>NP_008955 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 DLAQRFAF 9 D+A FAF Sbjct: 217 DMADHFAF 224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.142 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,095 Number of extensions: 629 Number of successful extensions: 59 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |