Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 299 NP_001269723 17 3301 NP_055705 17 3301 NP_001269722 17 3301 NP_001035924 17 3301 NP_878913 17 3301 XP_006713549 17 3301 NP_003757 17 4312 NP_057204 17 4312 NP_899196 17 4312 XP_005257817 17 4312 XP_005257816 17 4312 XP_005257815 17 4312 NP_078838 16 5631 NP_060890 16 5631 XP_006710817 16 5631 XP_005271062 16 5631 XP_005271061 16 5631 XP_006710816 16 5631 NP_542781 16 5631 NP_001121361 16 7355 NP_057714 16 7355 NP_001121362 16 7355 NP_001098998 16 7355 NP_945346 16 7355 NP_008855 16 7355 NP_001071634 16 7355 NP_003760 16 7355 NP_060020 16 7355 XP_006722833 16 7355 XP_006722832 16 7355 XP_005259639 16 7355 XP_006722075 16 7355 XP_005254494 16 7355 XP_005254493 16 7355 XP_006720627 16 7355 XP_005266998 16 7355 NP_006266 15 9605 NP_001244289 15 9605 NP_005617 15 9605 NP_981949 15 9605 NP_631895 15 9605 NP_001244290 15 9605 NP_004028 15 9605 XP_005268057 15 9605 XP_005268056 15 9605 XP_005268055 15 9605 XP_005270809 15 9605 NP_008856 15 9605 NP_001034554 15 9605>NP_004110 Length = 993 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DAEEAMYQ Sbjct: 949 DAEEAMYQ 956>NP_001269723 Length = 895 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_055705 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_001269722 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 127 TDVEEKMY 134>NP_001035924 Length = 1133 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 551 TDVEEKMY 558>NP_878913 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 551 TDVEEKMY 558>XP_006713549 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 TDAEEAMY 8 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_003757 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 223 DQEEAQYQ 230>NP_057204 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 27 DREEAFYQ 34>NP_899196 Length = 624 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 27 DREEAFYQ 34>XP_005257817 Length = 355 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 223 DQEEAQYQ 230>XP_005257816 Length = 382 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 223 DQEEAQYQ 230>XP_005257815 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 DAEEAMYQ 9 D EEA YQ Sbjct: 223 DQEEAQYQ 230>NP_078838 Length = 1094 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DAEEAMYQ 9 D +EA+YQ Sbjct: 559 DEDEALYQ 566>NP_060890 Length = 547 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDAEEAMY 8 ++AEEA+Y Sbjct: 259 SEAEEALY 266>XP_006710817 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDAEEAMY 8 ++AEEA+Y Sbjct: 27 SEAEEALY 34>XP_005271062 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDAEEAMY 8 ++AEEA+Y Sbjct: 28 SEAEEALY 35>XP_005271061 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDAEEAMY 8 ++AEEA+Y Sbjct: 259 SEAEEALY 266>XP_006710816 Length = 476 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TDAEEAMY 8 ++AEEA+Y Sbjct: 188 SEAEEALY 195>NP_542781 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DAEEAMY 8 DAE+A+Y Sbjct: 63 DAEDALY 69>NP_001121361 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 232 TEAKEEMYK 240>NP_057714 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 232 TEAKEEMYK 240>NP_001121362 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 205 TEAKEEMYK 213>NP_001098998 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAEEAMYQ 9 DAEEA+ Q Sbjct: 183 DAEEALKQ 190>NP_945346 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DAEEAMYQ 9 DAEEA+ Q Sbjct: 183 DAEEALKQ 190>NP_008855 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DAEEAMY 8 DAE+A+Y Sbjct: 66 DAEDAVY 72>NP_001071634 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DAEEAMY 8 DAE+A+Y Sbjct: 66 DAEDAVY 72>NP_003760 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DAEEAMY 8 DAE+A+Y Sbjct: 64 DAEDAIY 70>NP_060020 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 D+E+A+Y+ Sbjct: 266 DSEQALYE 273>XP_006722833 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 D+E+A+Y+ Sbjct: 190 DSEQALYE 197>XP_006722832 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 D+E+A+Y+ Sbjct: 268 DSEQALYE 275>XP_005259639 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 D+E+A+Y+ Sbjct: 268 DSEQALYE 275>XP_006722075 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DAEEAMY 8 DAE+A+Y Sbjct: 66 DAEDAVY 72>XP_005254494 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 232 TEAKEEMYK 240>XP_005254493 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 232 TEAKEEMYK 240>XP_006720627 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 TDAEEAMYQ 9 T+A+E MY+ Sbjct: 232 TEAKEEMYK 240>XP_005266998 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TDAEEA 6 TDAEEA Sbjct: 610 TDAEEA 615>NP_006266 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 47 DADDAVYE 54>NP_001244289 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 527 SDLEESKYQ 535>NP_005617 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 47 DADDAVYE 54>NP_981949 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 408 SDLEESKYQ 416>NP_631895 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 446 SDLEESKYQ 454>NP_001244290 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 409 SDLEESKYQ 417>NP_004028 Length = 879 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 527 SDLEESKYQ 535>XP_005268057 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 49 DADDAVYE 56>XP_005268056 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 49 DADDAVYE 56>XP_005268055 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 49 DADDAVYE 56>XP_005270809 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TDAEEAMYQ 9 +D EE+ YQ Sbjct: 452 SDLEESKYQ 460>NP_008856 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 49 DADDAVYE 56>NP_001034554 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 DAEEAMYQ 9 DA++A+Y+ Sbjct: 49 DADDAVYE 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.110 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 513,293 Number of extensions: 893 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |