Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_078914 17 2528 NP_001243764 17 2528 NP_149078 17 3301 NP_055178 17 4312 NP_001264984 17 4312 XP_005266395 17 4312 NP_001094857 17 4312 NP_055904 16 5631 NP_004757 16 5631 XP_006715095 16 5631 XP_006715094 16 5631 XP_006715093 16 5631 XP_006715092 16 5631 NP_001013754 16 7355 NP_872332 16 7355 NP_056541 16 7355 XP_006720125 16 7355 XP_005267432 16 7355 XP_005267431 16 7355 XP_005267430 16 7355 XP_006719830 16 7355 NP_694958 16 7355 NP_001128130 16 7355 NP_001053 16 7355 NP_002979 15 9605 NP_055768 15 9605 NP_001121698 15 9605 NP_001164120 15 9605 NP_001164121 15 9605 NP_112483 15 9605 NP_064547 15 9605 NP_001186628 15 9605 NP_060089 15 9605 NP_061903 15 9605 XP_005262364 15 9605 XP_005262358 15 9605 XP_005268376 15 9605 XP_005266351 15 9605 XP_006719841 15 9605 XP_006714716 15 9605 XP_006712519 15 9605 XP_006712518 15 9605 NP_002539 15 9605 NP_001028747 15 9605 NP_001004479 15 9605>NP_078914 Length = 415 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CLIYTKS 8 CL+YTK+ Sbjct: 33 CLLYTKT 39>NP_001243764 Length = 427 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CLIYTKS 8 CL+YTK+ Sbjct: 45 CLLYTKT 51>NP_149078 Length = 416 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TCLIYTKS 8 TC++YT S Sbjct: 316 TCVLYTPS 323>NP_055178 Length = 4579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TCLIYTKSL 9 TC + TKS+ Sbjct: 3428 TCYVLTKSI 3436>NP_001264984 Length = 4432 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TCLIYTKSL 9 TC + TKS+ Sbjct: 3281 TCYVLTKSI 3289>XP_005266395 Length = 4588 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TCLIYTKSL 9 TC + TKS+ Sbjct: 3437 TCYVLTKSI 3445>NP_001094857 Length = 137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TCLIYTKSL 9 TCL YT L Sbjct: 73 TCLAYTLKL 81>NP_055904 Length = 2517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TCLIYT 6 TCL YT Sbjct: 1314 TCLFYT 1319>NP_004757 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIYTKSL 9 C IYT S+ Sbjct: 533 CFIYTSSV 540>XP_006715095 Length = 2046 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TCLIYT 6 TCL YT Sbjct: 843 TCLFYT 848>XP_006715094 Length = 2407 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TCLIYT 6 TCL YT Sbjct: 1204 TCLFYT 1209>XP_006715093 Length = 2459 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TCLIYT 6 TCL YT Sbjct: 1256 TCLFYT 1261>XP_006715092 Length = 2490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 TCLIYT 6 TCL YT Sbjct: 1287 TCLFYT 1292>NP_001013754 Length = 846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 717 CLIYT 721>NP_872332 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 77 CLIYT 81>NP_056541 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 TCLIYT 6 TCL+Y+ Sbjct: 391 TCLVYS 396>XP_006720125 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 77 CLIYT 81>XP_005267432 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 77 CLIYT 81>XP_005267431 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 77 CLIYT 81>XP_005267430 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CLIYT Sbjct: 77 CLIYT 81>XP_006719830 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TCLIYTK 7 +CLIY K Sbjct: 401 SCLIYLK 407>NP_694958 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 CLIY K+ Sbjct: 114 CLIYRKT 120>NP_001128130 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 CLIY K+ Sbjct: 115 CLIYRKT 121>NP_001053 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IYTKSL 9 IYTKSL Sbjct: 219 IYTKSL 224>NP_002979 Length = 89 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 2 CLIYT 6 CL+YT Sbjct: 31 CLVYT 35>NP_055768 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TCLIYTKSL 9 TC Y KSL Sbjct: 193 TCEEYVKSL 201>NP_001121698 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TCLIYTKSL 9 TC Y KSL Sbjct: 163 TCEEYVKSL 171>NP_001164120 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C IYT+S Sbjct: 487 CSIYTQS 493>NP_001164121 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C IYT+S Sbjct: 445 CSIYTQS 451>NP_112483 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C IYT+S Sbjct: 504 CSIYTQS 510>NP_064547 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CLIYTKSL 9 C++YT+ L Sbjct: 665 CVVYTELL 672>NP_001186628 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 CLIYTKSL 9 C++YT+ L Sbjct: 492 CVVYTELL 499>NP_060089 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CLIYTKSL 9 C IY K+L Sbjct: 420 CRIYVKNL 427>NP_061903 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIYTKSL 9 +IYTKS+ Sbjct: 1231 IIYTKSV 1237>XP_005262364 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C IYT+S Sbjct: 202 CSIYTQS 208>XP_005262358 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C IYT+S Sbjct: 504 CSIYTQS 510>XP_005268376 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CLIYTKSL 9 CLI+T S+ Sbjct: 526 CLIWTTSV 533>XP_005266351 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TCLIYTKSL 9 TC Y KSL Sbjct: 31 TCEEYVKSL 39>XP_006719841 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 TCLIYTKSL 9 TC Y KSL Sbjct: 70 TCEEYVKSL 78>XP_006714716 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIYTKSL 9 +IYTKS+ Sbjct: 1180 IIYTKSV 1186>XP_006712519 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 CL+Y K+ Sbjct: 99 CLVYCKN 105>XP_006712518 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 CL+Y K+ Sbjct: 99 CLVYCKN 105>NP_002539 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 CLIYTKSL 9 C++Y K L Sbjct: 256 CMVYLKPL 263>NP_001028747 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 CL+Y K+ Sbjct: 99 CLVYCKN 105>NP_001004479 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 CLIYTKS 8 C+ YT+S Sbjct: 207 CIFYTQS 213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.136 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 571,243 Number of extensions: 983 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |