Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_542194 16 5631 NP_001275637 16 5631 NP_940873 16 5631 NP_954650 16 5631 XP_006722781 16 5631 XP_005272524 16 5631 NP_001135389 16 5631 NP_997191 16 7355 NP_002909 16 7355 NP_001152956 16 7355 NP_001171864 16 7355 NP_053586 16 7355 NP_053584 16 7355 NP_004874 16 7355 NP_053585 16 7355 XP_006722894 16 7355 XP_006722893 16 7355 XP_006722892 16 7355 XP_006714873 16 7355 XP_006714872 16 7355 XP_006714871 16 7355 XP_006711682 16 7355 NP_001138890 15 9605 NP_001269777 15 9605 NP_835260 15 9605 NP_690608 15 9605 NP_004674 15 9605 XP_006724234 15 9605 XP_005261462 15 9605 XP_006714523 15 9605 XP_005248329 15 9605 XP_005248328 15 9605 XP_006714522 15 9605 XP_006714521 15 9605 XP_006714520 15 9605 XP_005248327 15 9605 XP_005248326 15 9605 XP_006714519 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TASQTGQVS 9 TASQTG VS Sbjct: 1923 TASQTGLVS 1931>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TASQTGQVS 9 TASQTG VS Sbjct: 1718 TASQTGLVS 1726>NP_542194 Length = 1661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASQTGQV 8 A+QTGQV Sbjct: 285 AAQTGQV 291>NP_001275637 Length = 158 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TASQTGQV 8 +ASQTG++ Sbjct: 5 SASQTGEI 12>NP_940873 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASQTGQVS 9 ASQTGQ + Sbjct: 692 ASQTGQTA 699>NP_954650 Length = 1016 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ASQTGQV 8 A+QTGQV Sbjct: 47 AAQTGQV 53>XP_006722781 Length = 821 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASQTGQVS 9 ASQTGQ + Sbjct: 692 ASQTGQTA 699>XP_005272524 Length = 872 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ASQTGQVS 9 ASQTGQ + Sbjct: 743 ASQTGQTA 750>NP_001135389 Length = 1335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 TASQTGQ 7 TASQTG+ Sbjct: 566 TASQTGK 572>NP_997191 Length = 1888 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 TASQ GQ + Sbjct: 322 TASQLGQTN 330>NP_002909 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TASQTG 6 TASQTG Sbjct: 124 TASQTG 129>NP_001152956 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 TASQ GQ + Sbjct: 322 TASQLGQTN 330>NP_001171864 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>NP_053586 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>NP_053584 Length = 844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>NP_004874 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>NP_053585 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>XP_006722894 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TASQTG 6 TASQTG Sbjct: 15 TASQTG 20>XP_006722893 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TASQTG 6 TASQTG Sbjct: 15 TASQTG 20>XP_006722892 Length = 979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TASQTG 6 TASQTG Sbjct: 124 TASQTG 129>XP_006714873 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>XP_006714872 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 244 SQTGQV 249>XP_006714871 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SQTGQV 8 SQTGQV Sbjct: 41 SQTGQV 46>XP_006711682 Length = 1739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 TASQ GQ + Sbjct: 173 TASQLGQTN 181>NP_001138890 Length = 2481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TASQTGQ 7 TAS+TG+ Sbjct: 1840 TASETGE 1846>NP_001269777 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTGQVS 9 QTGQ+S Sbjct: 130 QTGQIS 135>NP_835260 Length = 2839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1252 TSVDTGQVS 1260>NP_690608 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTGQVS 9 QTGQ+S Sbjct: 183 QTGQIS 188>NP_004674 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QTGQVS 9 QTGQ+S Sbjct: 183 QTGQIS 188>XP_006724234 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TASQTGQ 7 TAS+TG+ Sbjct: 1722 TASETGE 1728>XP_005261462 Length = 2473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TASQTGQ 7 TAS+TG+ Sbjct: 1840 TASETGE 1846>XP_006714523 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 921 TSVDTGQVS 929>XP_005248329 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1078 TSVDTGQVS 1086>XP_005248328 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1078 TSVDTGQVS 1086>XP_006714522 Length = 2719 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1098 TSVDTGQVS 1106>XP_006714521 Length = 2781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1160 TSVDTGQVS 1168>XP_006714520 Length = 2802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1181 TSVDTGQVS 1189>XP_005248327 Length = 2839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1252 TSVDTGQVS 1260>XP_005248326 Length = 2873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1252 TSVDTGQVS 1260>XP_006714519 Length = 2873 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TASQTGQVS 9 T+ TGQVS Sbjct: 1252 TSVDTGQVS 1260Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.0958 0.220 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,034 Number of extensions: 404 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |