Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000213                                                              20     509
NP_001087241                                                           20     509
XP_006714101                                                           20     509
XP_005265799                                                           20     509
XP_005265798                                                           20     509
XP_005265797                                                           20     509
NP_001258218                                                           17    2528
NP_001258217                                                           17    2528
NP_001258216                                                           17    2528
NP_001258247                                                           17    2528
NP_115810                                                              17    2528
NP_001258215                                                           17    2528
NP_950238                                                              17    3301
NP_001014436                                                           17    3301
NP_001116428                                                           17    3301
NP_054782                                                              17    3301
NP_001271244                                                           17    3301
NP_001271242                                                           17    3301
NP_001135768                                                           16    5631
NP_001135766                                                           16    5631
NP_001135767                                                           16    5631
NP_055902                                                              16    5631
NP_001135918                                                           16    5631
NP_065208                                                              16    5631
XP_005266373                                                           16    5631
XP_005266372                                                           16    5631
XP_005266374                                                           16    5631
XP_005266370                                                           16    5631
XP_005266371                                                           16    5631
XP_005273533                                                           16    5631
NP_065210                                                              16    5631
NP_065209                                                              16    5631
NP_000028                                                              16    5631
NP_001077377                                                           16    7355
NP_060609                                                              16    7355
NP_005914                                                              16    7355
NP_062541                                                              16    7355
NP_671494                                                              16    7355
NP_006268                                                              16    7355
NP_114161                                                              16    7355
XP_005267047                                                           16    7355
XP_006715545                                                           16    7355
XP_005267048                                                           16    7355
XP_006713841                                                           16    7355
NP_878918                                                              15    9605
NP_055995                                                              15    9605
NP_056099                                                              15    9605
NP_001007103                                                           15    9605
NP_115814                                                              15    9605
NP_059138                                                              15    9605
NP_001119595                                                           15    9605
NP_694996                                                              15    9605
NP_775735                                                              15    9605
NP_443173                                                              15    9605
NP_113676                                                              15    9605
NP_001265227                                                           15    9605
NP_059982                                                              15    9605
NP_974487                                                              15    9605
XP_006722429                                                           15    9605
XP_006722428                                                           15    9605
XP_006722427                                                           15    9605
XP_006722426                                                           15    9605
XP_005258225                                                           15    9605
XP_006722425                                                           15    9605
XP_005258223                                                           15    9605
XP_006720147                                                           15    9605
XP_005267517                                                           15    9605
XP_005267516                                                           15    9605
XP_005267515                                                           15    9605
XP_005267514                                                           15    9605
XP_005267513                                                           15    9605
XP_005267512                                                           15    9605
XP_005267511                                                           15    9605
XP_005267218                                                           15    9605
XP_006715641                                                           15    9605
XP_006715640                                                           15    9605
XP_006715639                                                           15    9605
XP_006710565                                                           15    9605
XP_006710564                                                           15    9605
XP_005270743                                                           15    9605
>NP_000213
          Length = 976

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 303 TTLEVVDKG 311
>NP_001087241
          Length = 972

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 303 TTLEVVDKG 311
>XP_006714101
          Length = 526

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 304 TTLEVVDKG 312
>XP_005265799
          Length = 973

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 304 TTLEVVDKG 312
>XP_005265798
          Length = 976

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 304 TTLEVVDKG 312
>XP_005265797
          Length = 977

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T LEVVDKG
Sbjct: 304 TTLEVVDKG 312
>NP_001258218
          Length = 462

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  LEVVDKG 9
          LE+VDKG
Sbjct: 56 LEIVDKG 62
>NP_001258217
          Length = 490

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  LEVVDKG 9
          LE+VDKG
Sbjct: 84 LEIVDKG 90
>NP_001258216
          Length = 490

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  LEVVDKG 9
          LE+VDKG
Sbjct: 84 LEIVDKG 90
>NP_001258247
          Length = 490

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  LEVVDKG 9
          LE+VDKG
Sbjct: 84 LEIVDKG 90
>NP_115810
          Length = 567

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   LEVVDKG 9
           LE+VDKG
Sbjct: 161 LEIVDKG 167
>NP_001258215
          Length = 538

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   LEVVDKG 9
           LE+VDKG
Sbjct: 132 LEIVDKG 138
>NP_950238
          Length = 268

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   LEVVDKG 9
           +EVVDKG
Sbjct: 144 IEVVDKG 150
>NP_001014436
          Length = 430

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T +EV+D+G
Sbjct: 399 TGIEVIDEG 407
>NP_001116428
          Length = 439

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T +EV+D+G
Sbjct: 408 TGIEVIDEG 416
>NP_054782
          Length = 431

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T +EV+D+G
Sbjct: 400 TGIEVIDEG 408
>NP_001271244
          Length = 336

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T +EV+D+G
Sbjct: 305 TGIEVIDEG 313
>NP_001271242
          Length = 327

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           T +EV+D+G
Sbjct: 296 TGIEVIDEG 304
>NP_001135768
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>NP_001135766
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>NP_001135767
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>NP_055902
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>NP_001135918
          Length = 1897

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1510 TALQSIDRG 1518
>NP_065208
          Length = 1856

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1469 TALQSIDRG 1477
>XP_005266373
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>XP_005266372
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>XP_005266374
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>XP_005266370
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>XP_005266371
          Length = 666

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  TALEVVDKG 9
          T LE+++KG
Sbjct: 90 TRLEILEKG 98
>XP_005273533
          Length = 1921

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1510 TALQSIDRG 1518
>NP_065210
          Length = 1719

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1469 TALQSIDRG 1477
>NP_065209
          Length = 1881

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1469 TALQSIDRG 1477
>NP_000028
          Length = 1880

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    TALEVVDKG 9
            TAL+ +D+G
Sbjct: 1469 TALQSIDRG 1477
>NP_001077377
          Length = 789

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TALEVVDK 8
           TALE V+K
Sbjct: 167 TALEAVEK 174
>NP_060609
          Length = 837

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TALEVVDK 8
           TALE V+K
Sbjct: 167 TALEAVEK 174
>NP_005914
          Length = 1374

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           A E++DKG
Sbjct: 847 APEIIDKG 854
>NP_062541
          Length = 1670

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TALEVVDK 8
           T LEV+DK
Sbjct: 521 TELEVLDK 528
>NP_671494
          Length = 1249

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TALEVVDK 8
           T LEV+DK
Sbjct: 521 TELEVLDK 528
>NP_006268
          Length = 1697

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   TALEVVDK 8
           T LEV+DK
Sbjct: 521 TELEVLDK 528
>NP_114161
          Length = 569

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TALEVVDKG 9
           TALE+  KG
Sbjct: 201 TALELCSKG 209
>XP_005267047
          Length = 1448

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           A E++DKG
Sbjct: 920 APEIIDKG 927
>XP_006715545
          Length = 1483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           A E++DKG
Sbjct: 956 APEIIDKG 963
>XP_005267048
          Length = 1484

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           A E++DKG
Sbjct: 956 APEIIDKG 963
>XP_006713841
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TALEVVDKG 9
           TALE+  KG
Sbjct: 201 TALELCSKG 209
>NP_878918
          Length = 6907

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>NP_055995
          Length = 6885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>NP_056099
          Length = 3375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 2595 LEVVDK 2600
>NP_001007103
          Length = 755

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 456 LEVVDK 461
>NP_115814
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 481 LEVVDK 486
>NP_059138
          Length = 1032

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   TALEVVDKG 9
           TAL V+D G
Sbjct: 244 TALRVLDVG 252
>NP_001119595
          Length = 361

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  ALEVVDKG 9
          ALE++ KG
Sbjct: 82 ALEILQKG 89
>NP_694996
          Length = 2526

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           TALE+ +KG
Sbjct: 937 TALELRNKG 945
>NP_775735
          Length = 623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>NP_443173
          Length = 640

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  ALEVVDK 8
          ALE++DK
Sbjct: 42 ALEILDK 48
>NP_113676
          Length = 705

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 329 LEVVDK 334
>NP_001265227
          Length = 2614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   TALEVVDKG 9
           TALE+ +KG
Sbjct: 937 TALELRNKG 945
>NP_059982
          Length = 443

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           ALE++ KG
Sbjct: 164 ALEILQKG 171
>NP_974487
          Length = 450

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   ALEVVDKG 9
           ALE++ KG
Sbjct: 185 ALEILQKG 192
>XP_006722429
          Length = 331

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_006722428
          Length = 370

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_006722427
          Length = 485

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_006722426
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 215 LEVVDK 220
>XP_005258225
          Length = 534

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_006722425
          Length = 593

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_005258223
          Length = 614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 302 LEVVDK 307
>XP_006720147
          Length = 4788

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267517
          Length = 6883

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267516
          Length = 6884

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267515
          Length = 6899

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267514
          Length = 6908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267513
          Length = 6921

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267512
          Length = 6922

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267511
          Length = 6922

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 1588 LEVVDK 1593
>XP_005267218
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 481 LEVVDK 486
>XP_006715641
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 481 LEVVDK 486
>XP_006715640
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 481 LEVVDK 486
>XP_006715639
          Length = 815

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   LEVVDK 8
           LEVVDK
Sbjct: 516 LEVVDK 521
>XP_006710565
          Length = 3140

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 2360 LEVVDK 2365
>XP_006710564
          Length = 3432

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 2652 LEVVDK 2657
>XP_005270743
          Length = 3453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3    LEVVDK 8
            LEVVDK
Sbjct: 2673 LEVVDK 2678
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.307    0.130    0.330 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 431,438
Number of extensions: 655
Number of successful extensions: 80
Number of sequences better than 10000.0: 80
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 80
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package