Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 18 1135 XP_006717990 18 1135 XP_006717989 18 1135 NP_001245210 18 1482 NP_000242 18 1482 NP_733841 18 1482 NP_004671 18 1482 NP_001003895 18 1482 XP_005264389 18 1482 NP_001003894 18 1482 NP_004816 17 3301 XP_005259889 17 3301 NP_001001722 17 3301 NP_001035706 17 4312 XP_005255000 17 4312 XP_005254998 17 4312 NP_001229792 15 9605 NP_060463 15 9605 NP_056040 15 9605 NP_001121087 15 9605 NP_036443 15 9605 XP_006719905 15 9605 XP_006719904 15 9605 XP_005266496 15 9605 XP_005266495 15 9605 XP_006717498 15 9605 XP_006717497 15 9605 XP_005251811 15 9605 XP_005251810 15 9605 XP_005251809 15 9605 XP_005251808 15 9605 XP_005251807 15 9605 XP_005251805 15 9605 XP_005251803 15 9605 XP_006717050 15 9605 XP_005251802 15 9605 XP_006717049 15 9605 XP_006717048 15 9605 XP_006717047 15 9605 XP_006717046 15 9605 XP_006717045 15 9605>NP_000305 Length = 403 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TAIIKEIVN 9 TAIIKEIV+ Sbjct: 2 TAIIKEIVS 10>XP_006717990 Length = 175 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TAIIKEIVN 9 TAIIKEIV+ Sbjct: 2 TAIIKEIVS 10>XP_006717989 Length = 388 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 TAIIKEIVN 9 TAIIKEIV+ Sbjct: 2 TAIIKEIVS 10>NP_001245210 Length = 868 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KEIVN Sbjct: 510 AIVKEIVN 517>NP_000242 Length = 934 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KEIVN Sbjct: 576 AIVKEIVN 583>NP_733841 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKEIVN Sbjct: 311 TEVIKEIVN 319>NP_004671 Length = 554 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKEIVN Sbjct: 311 TEVIKEIVN 319>NP_001003895 Length = 554 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKEIVN Sbjct: 311 TEVIKEIVN 319>XP_005264389 Length = 921 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KEIVN Sbjct: 576 AIVKEIVN 583>NP_001003894 Length = 540 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKEIVN Sbjct: 311 TEVIKEIVN 319>NP_004816 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKE+VN Sbjct: 312 TEVIKEMVN 320>XP_005259889 Length = 1130 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 TAI KE++N Sbjct: 417 TAICKEVLN 425>NP_001001722 Length = 541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAIIKEIVN 9 T +IKE+VN Sbjct: 312 TEVIKEMVN 320>NP_001035706 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TAIIKEI 7 TAIIKEI Sbjct: 195 TAIIKEI 201>XP_005255000 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TAIIKEI 7 TAIIKEI Sbjct: 195 TAIIKEI 201>XP_005254998 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 TAIIKEI 7 TAIIKEI Sbjct: 195 TAIIKEI 201>NP_001229792 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>NP_060463 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>NP_056040 Length = 3088 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>NP_001121087 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>NP_036443 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KE+++ Sbjct: 303 AIVKEVID 310>XP_006719905 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>XP_006719904 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>XP_005266496 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 109 AVVKEIIH 116>XP_005266495 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 A++KEI++ Sbjct: 144 AVVKEIIH 151>XP_006717498 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KE+++ Sbjct: 197 AIVKEVID 204>XP_006717497 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 AIIKEIVN 9 AI+KE+++ Sbjct: 303 AIVKEVID 310>XP_005251811 Length = 3060 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251810 Length = 3062 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251809 Length = 3063 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251808 Length = 3075 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251807 Length = 3088 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251805 Length = 3090 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251803 Length = 3091 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717050 Length = 3092 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_005251802 Length = 3092 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717049 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717048 Length = 3101 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717047 Length = 3101 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717046 Length = 3103 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354>XP_006717045 Length = 3104 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 3 IIKEIVN 9 ++KE++N Sbjct: 348 VVKEVIN 354Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.135 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 382,354 Number of extensions: 498 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |