Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167571 17 2528 NP_127503 17 2528 NP_127501 17 2528 NP_065151 17 2528 XP_006713333 17 2528 XP_005265389 17 2528 XP_005265388 17 2528 XP_006713332 17 2528 XP_006713331 17 2528 XP_006713330 17 2528 XP_006713329 17 2528 XP_005265387 17 2528 NP_060501 17 3301 NP_000284 17 4312 NP_001027005 17 4312 NP_079335 17 4312 XP_005256041 17 4312 XP_005256040 17 4312 XP_006715631 17 4312 XP_006710061 17 4312 XP_006710060 17 4312 NP_003238 16 5631 NP_689594 16 5631 XP_006712319 16 5631 NP_001186073 16 5631 NP_003822 16 5631 NP_002833 16 7355 NP_001154912 16 7355 NP_055968 16 7355 NP_001277188 16 7355 NP_009016 16 7355 NP_065831 16 7355 XP_006723375 16 7355 XP_006715490 16 7355 XP_005248760 16 7355 XP_005248759 16 7355 XP_006715489 16 7355 XP_005248758 16 7355 XP_006711904 16 7355 NP_001026 15 9605 NP_061027 15 9605 NP_115518 15 9605 NP_057058 15 9605 XP_006722394 15 9605 XP_005258167 15 9605 XP_006722393 15 9605 XP_006722392 15 9605 XP_006722391 15 9605 XP_006722390 15 9605 XP_005258166 15 9605 XP_006722389 15 9605 XP_005258165 15 9605 XP_005258164 15 9605 XP_005266473 15 9605 XP_006711873 15 9605 XP_006711872 15 9605 XP_006711871 15 9605 XP_006711870 15 9605 XP_006711869 15 9605 XP_006711868 15 9605 XP_006711867 15 9605 XP_006711866 15 9605 XP_006711865 15 9605>NP_001167571 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>NP_127503 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>NP_127501 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>NP_065151 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 263 TACLETAK 270>XP_006713333 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 263 TACLETAK 270>XP_005265389 Length = 383 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 286 TACLETAK 293>XP_005265388 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>XP_006713332 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>XP_006713331 Length = 403 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 306 TACLETAK 313>XP_006713330 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 327 TACLETAK 334>XP_006713329 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 327 TACLETAK 334>XP_005265387 Length = 426 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 TACLSTSK 8 TACL T+K Sbjct: 329 TACLETAK 336>NP_060501 Length = 1151 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CLSTSKI 9 CLSTS+I Sbjct: 23 CLSTSRI 29>NP_000284 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSTSKI 9 CL TSKI Sbjct: 559 CLGTSKI 565>NP_001027005 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSTSKI 9 CL TSKI Sbjct: 552 CLGTSKI 558>NP_079335 Length = 715 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TACLSTSKI 9 +A LSTSKI Sbjct: 112 SAALSTSKI 120>XP_005256041 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSTSKI 9 CL TSKI Sbjct: 552 CLGTSKI 558>XP_005256040 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CLSTSKI 9 CL TSKI Sbjct: 559 CLGTSKI 565>XP_006715631 Length = 648 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 TACLSTSKI 9 +A LSTSKI Sbjct: 112 SAALSTSKI 120>XP_006710061 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TACLST 6 TACLST Sbjct: 267 TACLST 272>XP_006710060 Length = 425 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TACLST 6 TACLST Sbjct: 394 TACLST 399>NP_003238 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 CLSTSKI 9 C STSK+ Sbjct: 601 CFSTSKV 607>NP_689594 Length = 3549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TACLSTSK 8 T+C+STS+ Sbjct: 412 TSCVSTSQ 419>XP_006712319 Length = 3308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TACLSTSK 8 T+C+STS+ Sbjct: 171 TSCVSTSQ 178>NP_001186073 Length = 3327 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TACLSTSK 8 T+C+STS+ Sbjct: 190 TSCVSTSQ 197>NP_003822 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 TACLSTSK 8 T C+ST K Sbjct: 254 TGCISTGK 261>NP_002833 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TACLSTS 7 T+C+STS Sbjct: 671 TSCVSTS 677>NP_001154912 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TACLSTS 7 T+C+STS Sbjct: 493 TSCVSTS 499>NP_055968 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 1356 SACASTSHI 1364>NP_001277188 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 1268 SACASTSHI 1276>NP_009016 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ACLSTSKI 9 ACL+ SKI Sbjct: 83 ACLTGSKI 90>NP_065831 Length = 1392 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 TACLST 6 TAC+ST Sbjct: 885 TACMST 890>XP_006723375 Length = 1137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 TACLSTS 7 T+C+STS Sbjct: 693 TSCVSTS 699>XP_006715490 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 498 SACASTSHI 506>XP_005248760 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 625 SACASTSHI 633>XP_005248759 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 1268 SACASTSHI 1276>XP_006715489 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 1356 SACASTSHI 1364>XP_005248758 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 +AC STS I Sbjct: 1356 SACASTSHI 1364>XP_006711904 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TACLSTSK 8 ++CLSTS+ Sbjct: 37 SSCLSTSQ 44>NP_001026 Length = 4967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>NP_061027 Length = 4599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ACLSTSK 8 ACL T+K Sbjct: 83 ACLGTNK 89>NP_115518 Length = 2537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2400 ACLSTDSL 2407>NP_057058 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 T+CL SK+ Sbjct: 123 TSCLMPSKL 131>XP_006722394 Length = 1845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 1707 ACLSTDSL 1714>XP_005258167 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 1718 ACLSTDSL 1725>XP_006722393 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2061 ACLSTDSL 2068>XP_006722392 Length = 2444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2306 ACLSTDSL 2313>XP_006722391 Length = 2448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2310 ACLSTDSL 2317>XP_006722390 Length = 2467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2330 ACLSTDSL 2337>XP_005258166 Length = 2468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2330 ACLSTDSL 2337>XP_006722389 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2400 ACLSTDSL 2407>XP_005258165 Length = 2534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2396 ACLSTDSL 2403>XP_005258164 Length = 2538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 ACLSTSKI 9 ACLST + Sbjct: 2400 ACLSTDSL 2407>XP_005266473 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TACLSTSKI 9 T+CL SK+ Sbjct: 123 TSCLMPSKL 131>XP_006711873 Length = 4954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711872 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711871 Length = 4906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711870 Length = 4965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711869 Length = 4973 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711868 Length = 4975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711867 Length = 4977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711866 Length = 4984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137>XP_006711865 Length = 4985 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLSTSK 8 CLSTS+ Sbjct: 132 CLSTSR 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.114 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 578,461 Number of extensions: 531 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |