Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_001124320 17 3301 NP_004901 17 3301 NP_065702 17 4312 XP_005267947 17 4312 XP_006720274 17 4312 XP_005264494 17 4312 XP_005264493 17 4312 NP_067078 17 4312 NP_001243372 16 5631 NP_001243371 16 5631 NP_005468 16 5631 NP_660282 16 5631 NP_065948 16 5631 NP_006826 16 5631 NP_998761 16 5631 NP_001363 16 5631 NP_001185 16 5631 NP_066550 16 5631 XP_005276805 16 5631 XP_006721528 16 5631 XP_006721069 16 5631 XP_005245431 16 5631 NP_004653 16 5631 NP_054799 16 7355 NP_006452 16 7355 NP_005303 16 7355 NP_941372 16 7355 NP_705833 16 7355 XP_005254478 16 7355 XP_005272252 16 7355 XP_006717137 16 7355 XP_006717136 16 7355 XP_005272248 16 7355 XP_006717135 16 7355 XP_006717134 16 7355 XP_006717133 16 7355 XP_006717132 16 7355 XP_005272243 16 7355 XP_005272242 16 7355 XP_006717131 16 7355 XP_006717130 16 7355 XP_005247174 16 7355 NP_009036 16 7355 NP_002114 15 9605 NP_001230890 15 9605 NP_003079 15 9605 NP_787954 15 9605 NP_059130 15 9605 NP_877398 15 9605 NP_056007 15 9605 NP_055969 15 9605 NP_055918 15 9605 NP_055565 15 9605 NP_006043 15 9605 NP_001139487 15 9605 XP_005260968 15 9605 XP_005260966 15 9605 XP_005260738 15 9605 XP_006723618 15 9605 XP_005254520 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 TAAPVD VF Sbjct: 476 TAAPVDSVF 484>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 TAAPVD VF Sbjct: 271 TAAPVDSVF 279>NP_001124320 Length = 1243 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAPVDFV 8 AAPVDF+ Sbjct: 1194 AAPVDFL 1200>NP_004901 Length = 1244 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AAPVDFV 8 AAPVDF+ Sbjct: 1195 AAPVDFL 1201>NP_065702 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 106 TESPIDFV 113>XP_005267947 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 108 TESPIDFV 115>XP_006720274 Length = 320 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 8 TESPIDFV 15>XP_005264494 Length = 320 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 8 TESPIDFV 15>XP_005264493 Length = 352 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 40 TESPIDFV 47>NP_067078 Length = 420 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +P+DFV Sbjct: 108 TESPIDFV 115>NP_001243372 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAAPVD 6 TAAPVD Sbjct: 55 TAAPVD 60>NP_001243371 Length = 394 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAAPVD 6 TAAPVD Sbjct: 55 TAAPVD 60>NP_005468 Length = 1203 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 348 SSIPVDYIF 356>NP_660282 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAAPVD 6 TAAPVD Sbjct: 55 TAAPVD 60>NP_065948 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 179 SSIPVDYIF 187>NP_006826 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 TA P+DF+ Sbjct: 144 TATPLDFL 151>NP_998761 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 APVDFV 8 APVDF+ Sbjct: 403 APVDFI 408>NP_001363 Length = 4486 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 TA+PV+F+ Sbjct: 3786 TASPVEFL 3793>NP_001185 Length = 889 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 297 SSIPVDYIF 305>NP_066550 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 228 SSIPVDYIF 236>XP_005276805 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 179 SSIPVDYIF 187>XP_006721528 Length = 3869 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 TA+PV+F+ Sbjct: 3786 TASPVEFL 3793>XP_006721069 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 TAAPVD 6 TAAPVD Sbjct: 55 TAAPVD 60>XP_005245431 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 TAAPVDFVF 9 ++ PVD++F Sbjct: 179 SSIPVDYIF 187>NP_004653 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 TA+PV+F+ Sbjct: 98 TASPVEFL 105>NP_054799 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAPVDFVF 9 TAA V F+F Sbjct: 1086 TAASVSFMF 1094>NP_006452 Length = 1193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AAPVDFV 8 ++PVDFV Sbjct: 65 SSPVDFV 71>NP_005303 Length = 1077 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 518 SSAPVEFV 525>NP_941372 Length = 1095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 536 SSAPVEFV 543>NP_705833 Length = 2970 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 PVDFVF 9 P+D+VF Sbjct: 2744 PIDYVF 2749>XP_005254478 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAPVDFVF 9 TAA V F+F Sbjct: 1086 TAASVSFMF 1094>XP_005272252 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 535 SSAPVEFV 542>XP_006717137 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_006717136 Length = 1200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 503 SSAPVEFV 510>XP_005272248 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 497 SSAPVEFV 504>XP_006717135 Length = 1232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 503 SSAPVEFV 510>XP_006717134 Length = 1238 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_006717133 Length = 1239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_006717132 Length = 1254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_005272243 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 535 SSAPVEFV 542>XP_005272242 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 536 SSAPVEFV 543>XP_006717131 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_006717130 Length = 1270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 TAAPVDFV 8 ++APV+FV Sbjct: 541 SSAPVEFV 548>XP_005247174 Length = 2679 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 PVDFVF 9 P+D+VF Sbjct: 2453 PIDYVF 2458>NP_009036 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T AP+DF+ Sbjct: 26 TLAPLDFL 33>NP_002114 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 APVDFVF 9 +P DFVF Sbjct: 35 SPEDFVF 41>NP_001230890 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 APVDFVF 9 +P DFVF Sbjct: 35 SPEDFVF 41>NP_003079 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 PVDFVF 9 PVDF F Sbjct: 448 PVDFFF 453>NP_787954 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TAAPVDFVF 9 TAA + F+F Sbjct: 1089 TAASISFMF 1097>NP_059130 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TAAPVDFVF 9 TAA + F+F Sbjct: 1089 TAASISFMF 1097>NP_877398 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +PV+FV Sbjct: 580 TKSPVEFV 587>NP_056007 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +PV+FV Sbjct: 580 TKSPVEFV 587>NP_055969 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AAPVDF 7 +APVDF Sbjct: 88 SAPVDF 93>NP_055918 Length = 1925 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AAPVDF 7 +APVDF Sbjct: 1134 SAPVDF 1139>NP_055565 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 APVDFVF 9 AP DF+F Sbjct: 308 APKDFMF 314>NP_006043 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAAPVDF 7 T +PVDF Sbjct: 151 TPSPVDF 157>NP_001139487 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 APVDFVF 9 AP DF+F Sbjct: 308 APKDFMF 314>XP_005260968 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAAPVDF 7 T +PVDF Sbjct: 26 TPSPVDF 32>XP_005260966 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 TAAPVDF 7 T +PVDF Sbjct: 124 TPSPVDF 130>XP_005260738 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +PV+FV Sbjct: 580 TKSPVEFV 587>XP_006723618 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 TAAPVDFV 8 T +PV+FV Sbjct: 580 TKSPVEFV 587>XP_005254520 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 TAAPVDFVF 9 TAA + F+F Sbjct: 773 TAASISFMF 781Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.144 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 605,789 Number of extensions: 566 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |