Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 869 NP_001120972 19 869 XP_006716052 19 869 XP_006716051 19 869 NP_004477 17 3301 XP_006721060 17 3301 XP_005251989 17 3301 XP_005251988 17 3301 XP_005251987 17 3301 NP_001164192 17 4312 NP_001164188 17 4312 NP_001164187 17 4312 NP_055382 17 4312 NP_001164186 17 4312 NP_001164189 17 4312 NP_001164185 17 4312 NP_001164190 17 4312 NP_001164191 17 4312 XP_006721412 17 4312 XP_005256317 17 4312 XP_005256316 17 4312 XP_005256315 17 4312 XP_006721411 17 4312 NP_001243497 16 5631 NP_003612 16 5631 NP_001243498 16 5631 XP_006718416 16 5631 XP_006718415 16 5631 XP_006718414 16 5631 XP_006718413 16 5631 XP_005253234 16 5631 XP_006718412 16 5631 XP_005253233 16 5631 XP_005253232 16 5631 XP_005253231 16 5631 NP_001103132 16 7355 NP_054868 15 9605 XP_006726692 15 9605 XP_005250342 15 9605 XP_006714166 15 9605 XP_006714164 15 9605 XP_006714163 15 9605 XP_006714162 15 9605 XP_006714161 15 9605 XP_006714160 15 9605 XP_005262823 15 9605 XP_006710063 15 9605>NP_000236 Length = 1390 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 TA IQSEVH Sbjct: 151 TADIQSEVH 159>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 TA IQSEVH Sbjct: 151 TADIQSEVH 159>XP_006716052 Length = 1409 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 TA IQSEVH Sbjct: 170 TADIQSEVH 178>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 TA IQSEVH Sbjct: 170 TADIQSEVH 178>NP_004477 Length = 1002 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 T+A+QSE H Sbjct: 567 TSALQSEQH 575>XP_006721060 Length = 693 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+Q E+H Sbjct: 399 AAVQGEIH 406>XP_005251989 Length = 975 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 T+A+QSE H Sbjct: 540 TSALQSEQH 548>XP_005251988 Length = 1002 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 T+A+QSE H Sbjct: 567 TSALQSEQH 575>XP_005251987 Length = 1029 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 TAAIQSEVH 9 T+A+QSE H Sbjct: 594 TSALQSEQH 602>NP_001164192 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 299 AAVQSAVH 306>NP_001164188 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_001164187 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_055382 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 509 AAVQSAVH 516>NP_001164186 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 527 AAVQSAVH 534>NP_001164189 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 509 AAVQSAVH 516>NP_001164185 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 555 AAVQSAVH 562>NP_001164190 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 507 AAVQSAVH 514>NP_001164191 Length = 722 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 361 AAVQSAVH 368>XP_006721412 Length = 823 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 462 AAVQSAVH 469>XP_005256317 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 480 AAVQSAVH 487>XP_005256316 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 509 AAVQSAVH 516>XP_005256315 Length = 896 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 535 AAVQSAVH 542>XP_006721411 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AAIQSEVH 9 AA+QS VH Sbjct: 555 AAVQSAVH 562>NP_001243497 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 152 TAALHSESH 160>NP_003612 Length = 876 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 264 TAALHSESH 272>NP_001243498 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 121 TAALHSESH 129>XP_006718416 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 121 TAALHSESH 129>XP_006718415 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 187 TAALHSESH 195>XP_006718414 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 187 TAALHSESH 195>XP_006718413 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 264 TAALHSESH 272>XP_005253234 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 264 TAALHSESH 272>XP_006718412 Length = 927 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 264 TAALHSESH 272>XP_005253233 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 325 TAALHSESH 333>XP_005253232 Length = 948 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 325 TAALHSESH 333>XP_005253231 Length = 977 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 TAAIQSEVH 9 TAA+ SE H Sbjct: 325 TAALHSESH 333>NP_001103132 Length = 4284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 A+QSE+H Sbjct: 3080 ALQSELH 3086>NP_054868 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 A+Q+E+H Sbjct: 201 ALQAEIH 207>XP_006726692 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AIQSEVH 9 A+Q E+H Sbjct: 369 AVQGEIH 375>XP_005250342 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 A+Q+E+H Sbjct: 201 ALQAEIH 207>XP_006714166 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 69 SIQSELH 75>XP_006714164 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714163 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714162 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 10 SIQSELH 16>XP_006714161 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 19 SIQSELH 25>XP_006714160 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 69 SIQSELH 75>XP_005262823 Length = 1070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AIQSEVH 9 +IQSE+H Sbjct: 69 SIQSELH 75>XP_006710063 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 AIQSEVH 9 A+Q E+H Sbjct: 400 AVQGEIH 406Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.110 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 354,925 Number of extensions: 384 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |