Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065816 18 1935 XP_006710573 18 1935 XP_006710572 18 1935 XP_006710571 18 1935 XP_006710570 18 1935 XP_006710569 18 1935 XP_006710568 18 1935 XP_006710567 18 1935 XP_006710566 18 1935 XP_005245859 18 1935 NP_776173 17 4312 XP_005276340 17 4312 XP_006719419 17 4312 XP_006719416 17 4312 XP_006719415 17 4312 XP_006719414 17 4312 XP_006719412 17 4312 XP_006719411 17 4312 XP_005249981 17 4312 NP_001005212 16 5631 NP_001191746 16 5631 NP_116217 16 5631 NP_689688 16 5631 XP_006723092 16 5631 NP_001165599 16 7355 NP_757366 16 7355 NP_001810 16 7355 NP_001191385 16 7355 NP_004710 16 7355 XP_005254400 16 7355 XP_005254399 16 7355 XP_006719755 16 7355 XP_005269287 16 7355 NP_066986 16 7355 NP_001007189 15 9605 NP_001229825 15 9605 NP_001229826 15 9605 NP_065896 15 9605 NP_055477 15 9605 NP_001129501 15 9605 NP_009111 15 9605 XP_005261924 15 9605 XP_006724450 15 9605 XP_006724449 15 9605 XP_005261923 15 9605 XP_006724448 15 9605 XP_006724447 15 9605 XP_005261922 15 9605 XP_005261921 15 9605 XP_005261920 15 9605 XP_005261919 15 9605 XP_006719582 15 9605 XP_005253643 15 9605 XP_005253642 15 9605 XP_006719581 15 9605 XP_006719580 15 9605 XP_005253640 15 9605 XP_006719579 15 9605 XP_005253639 15 9605 XP_005277735 15 9605>NP_065816 Length = 5183 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3460 AYGRKAAQF 3468>XP_006710573 Length = 5177 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3454 AYGRKAAQF 3462>XP_006710572 Length = 5188 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3465 AYGRKAAQF 3473>XP_006710571 Length = 5194 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3471 AYGRKAAQF 3479>XP_006710570 Length = 5195 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3472 AYGRKAAQF 3480>XP_006710569 Length = 5212 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3489 AYGRKAAQF 3497>XP_006710568 Length = 5221 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3498 AYGRKAAQF 3506>XP_006710567 Length = 5222 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3499 AYGRKAAQF 3507>XP_006710566 Length = 5222 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3499 AYGRKAAQF 3507>XP_005245859 Length = 5223 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 +Y RK+AQF Sbjct: 3500 AYGRKAAQF 3508>NP_776173 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 676 TYSRKSAK 683>XP_005276340 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 86 TYSRKSAK 93>XP_006719419 Length = 443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 361 TYSRKSAK 368>XP_006719416 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 533 TYSRKSAK 540>XP_006719415 Length = 615 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 533 TYSRKSAK 540>XP_006719414 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 626 TYSRKSAK 633>XP_006719412 Length = 724 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 676 TYSRKSAK 683>XP_006719411 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 656 TYSRKSAK 663>XP_005249981 Length = 158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SYSRKSAQ 8 +YSRKSA+ Sbjct: 86 TYSRKSAK 93>NP_001005212 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYSRKSAQF 9 SY+R +AQF Sbjct: 93 SYTRCAAQF 101>NP_001191746 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 SYSRKS+ Sbjct: 275 SYSRKSS 281>NP_116217 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 SYSRKS+ Sbjct: 276 SYSRKSS 282>NP_689688 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 SYSRKS+ Sbjct: 276 SYSRKSS 282>XP_006723092 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 SYSRKS+ Sbjct: 275 SYSRKSS 281>NP_001165599 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKSAQF 9 SRKSA+F Sbjct: 10 SRKSAKF 16>NP_757366 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKSAQF 9 SRKSA+F Sbjct: 10 SRKSAKF 16>NP_001810 Length = 677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YSRKSAQF 9 Y +KSA+F Sbjct: 613 YRKKSAEF 620>NP_001191385 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 381 SFSRKSA 387>NP_004710 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SYSRKSAQ 8 SY RKS Q Sbjct: 1122 SYKRKSEQ 1129>XP_005254400 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKSAQF 9 SRKSA+F Sbjct: 57 SRKSAKF 63>XP_005254399 Length = 1379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SRKSAQF 9 SRKSA+F Sbjct: 57 SRKSAKF 63>XP_006719755 Length = 1418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SYSRKSAQ 8 SY RKS Q Sbjct: 1077 SYKRKSEQ 1084>XP_005269287 Length = 1527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SYSRKSAQ 8 SY RKS Q Sbjct: 1186 SYKRKSEQ 1193>NP_066986 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 381 SFSRKSA 387>NP_001007189 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>NP_001229825 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>NP_001229826 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>NP_065896 Length = 1349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>NP_055477 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>NP_001129501 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>NP_009111 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YSRKSAQF 9 YS+KSA + Sbjct: 506 YSQKSAMY 513>XP_005261924 Length = 1176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_006724450 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_006724449 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_005261923 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_006724448 Length = 1490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 376 SHSRKSA 382>XP_006724447 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_005261922 Length = 1525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_005261921 Length = 1581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_005261920 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_005261919 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SYSRKSA 7 S+SRKSA Sbjct: 489 SHSRKSA 495>XP_006719582 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253643 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 188 SRKMAQF 194>XP_005253642 Length = 1343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719581 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719580 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253640 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_006719579 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005253639 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SRKSAQF 9 SRK AQF Sbjct: 254 SRKMAQF 260>XP_005277735 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YSRKSAQF 9 YS+KSA + Sbjct: 475 YSQKSAMY 482Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.112 0.285 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 380,516 Number of extensions: 367 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |