Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_073713 19 869 XP_005273507 18 1935 NP_689997 17 4312 NP_001073291 16 5631 NP_000417 16 5631 NP_258428 16 5631 NP_004817 16 5631 NP_001277716 16 5631 NP_001191055 16 5631 NP_006143 16 5631 NP_001191056 16 5631 XP_005253431 16 5631 XP_006719140 16 5631 XP_006719139 16 5631 XP_005253429 16 5631 XP_006719138 16 5631 XP_005253428 16 5631 XP_005253427 16 5631 XP_005267039 16 5631 XP_005267038 16 5631 NP_001275927 16 7355 NP_001275928 16 7355 NP_057657 16 7355 NP_001245215 16 7355 NP_778205 16 7355 NP_778204 16 7355 NP_001269358 16 7355 NP_001245216 16 7355 NP_775785 16 7355 XP_005259984 16 7355 XP_005251979 16 7355 XP_006714605 16 7355 XP_006714604 16 7355 XP_006714603 16 7355 XP_006714602 16 7355 XP_006714601 16 7355 XP_006714600 16 7355 NP_001265514 15 9605 NP_001278232 15 9605 NP_001278214 15 9605 NP_006578 15 9605 NP_065944 15 9605 NP_065170 15 9605 XP_005245054 15 9605 XP_006711299 15 9605 XP_005245053 15 9605 XP_006711298 15 9605 XP_005245050 15 9605 XP_005245049 15 9605 XP_005245048 15 9605 XP_005245046 15 9605 XP_005245043 15 9605 XP_006711297 15 9605 XP_006711296 15 9605 XP_006711295 15 9605 XP_006711294 15 9605 XP_006711293 15 9605 XP_005245042 15 9605 XP_006711292 15 9605 XP_006711291 15 9605 XP_006711290 15 9605 XP_006711289 15 9605 XP_005245034 15 9605>NP_073713 Length = 985 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SYRVLGSRT 9 SY VLGSRT Sbjct: 138 SYGVLGSRT 146>XP_005273507 Length = 362 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YRVLGSR 8 YR+LGSR Sbjct: 22 YRILGSR 28>NP_689997 Length = 798 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 Y++LG RT Sbjct: 668 YQILGGRT 675>NP_001073291 Length = 3118 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YR++ SRT Sbjct: 2230 YRIVASRT 2237>NP_000417 Length = 3122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YR++ SRT Sbjct: 2230 YRIVASRT 2237>NP_258428 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YRVLGS 7 YRVLGS Sbjct: 746 YRVLGS 751>NP_004817 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YRVLGS 7 YRVLGS Sbjct: 742 YRVLGS 747>NP_001277716 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 YRVLGS 7 YRVLGS Sbjct: 740 YRVLGS 745>NP_001191055 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>NP_006143 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>NP_001191056 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_005253431 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_006719140 Length = 446 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 295 SWRILGSK 302>XP_006719139 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_005253429 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_006719138 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_005253428 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_005253427 Length = 499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYRVLGSR 8 S+R+LGS+ Sbjct: 348 SWRILGSK 355>XP_005267039 Length = 3206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YR++ SRT Sbjct: 2318 YRIVASRT 2325>XP_005267038 Length = 3210 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YR++ SRT Sbjct: 2318 YRIVASRT 2325>NP_001275927 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YRVLGSR 8 YRV GSR Sbjct: 557 YRVSGSR 563>NP_001275928 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YRVLGSR 8 YRV GSR Sbjct: 560 YRVSGSR 566>NP_057657 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YRVLGSR 8 YRV GSR Sbjct: 586 YRVSGSR 592>NP_001245215 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 103 YRVVKSRT 110>NP_778205 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RVLGSRT 9 RVLG RT Sbjct: 75 RVLGGRT 81>NP_778204 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RVLGSRT 9 RVLG RT Sbjct: 159 RVLGGRT 165>NP_001269358 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 42 YRVVKSRT 49>NP_001245216 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 139 YRVVKSRT 146>NP_775785 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_005259984 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YRVLGSR 8 YRV GSR Sbjct: 583 YRVSGSR 589>XP_005251979 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RVLGSRT 9 RVLG RT Sbjct: 159 RVLGGRT 165>XP_006714605 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_006714604 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_006714603 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_006714602 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_006714601 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>XP_006714600 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YRVLGSRT 9 YRV+ SRT Sbjct: 166 YRVVKSRT 173>NP_001265514 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RVLGSRT 9 R+LG RT Sbjct: 697 RILGGRT 703>NP_001278232 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SYRVLGSRT 9 SYR++G + Sbjct: 2400 SYRIIGGNS 2408>NP_001278214 Length = 4982 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SYRVLGSRT 9 SYR++G + Sbjct: 2400 SYRIIGGNS 2408>NP_006578 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RVLGSRT 9 R+LG RT Sbjct: 801 RILGGRT 807>NP_065944 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YRVLGSR 8 YRVLG + Sbjct: 1359 YRVLGDK 1365>NP_065170 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SYRVLGS 7 +YR+LGS Sbjct: 250 TYRLLGS 256>XP_005245054 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711299 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245053 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711298 Length = 1299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245050 Length = 1306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245049 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245048 Length = 1323 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245046 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245043 Length = 1389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711297 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711296 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 47 RVLGSR 52>XP_006711295 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 56 RVLGSR 61>XP_006711294 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711293 Length = 1402 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245042 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711292 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 90 RVLGSR 95>XP_006711291 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_006711290 Length = 1434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 90 RVLGSR 95>XP_006711289 Length = 1475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142>XP_005245034 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RVLGSR 8 RVLGSR Sbjct: 137 RVLGSR 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.131 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 540,395 Number of extensions: 1108 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |