Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 20 509 XP_005268094 20 509 NP_061897 17 2528 XP_005264436 17 2528 XP_006712098 17 2528 XP_006712097 17 2528 NP_002261 17 3301 NP_694858 17 3301 NP_001129668 17 3301 NP_056288 17 3301 NP_001129667 17 3301 NP_038461 17 3301 NP_001158051 17 3301 XP_006726675 17 3301 XP_005248557 17 3301 XP_005248558 17 3301 NP_066918 17 4312 XP_006712194 17 4312 XP_006712193 17 4312 XP_006712192 17 4312 XP_006712191 17 4312 NP_066954 16 5631 NP_821067 16 5631 NP_001180326 16 5631 NP_821070 16 5631 NP_821068 16 5631 NP_694996 16 5631 NP_001265227 16 5631 NP_001274152 16 7355 NP_073732 16 7355 NP_001243328 16 7355 NP_001274426 16 7355 NP_071929 16 7355 NP_001489 16 7355 NP_054858 16 7355 NP_114141 16 7355 NP_057323 16 7355 NP_001184044 16 7355 XP_006726569 16 7355 XP_005256732 16 7355 XP_006717414 16 7355 XP_005250584 16 7355 XP_006710281 16 7355 NP_001243330 16 7355 NP_000320 15 9605 NP_004358 15 9605 NP_113597 15 9605 NP_001107604 15 9605 NP_001157932 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605 XP_006710874 15 9605 NP_001005501 15 9605>NP_000360 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SYIVFVLTL 9 +YIVFVLTL Sbjct: 581 AYIVFVLTL 589>XP_005268094 Length = 764 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SYIVFVLTL 9 +YIVFVLTL Sbjct: 581 AYIVFVLTL 589>NP_061897 Length = 2071 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV TL Sbjct: 310 AYVVFVTTL 318>XP_005264436 Length = 1881 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV TL Sbjct: 310 AYVVFVTTL 318>XP_006712098 Length = 2059 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV TL Sbjct: 298 AYVVFVTTL 306>XP_006712097 Length = 2070 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV TL Sbjct: 310 AYVVFVTTL 318>NP_002261 Length = 898 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 56 NYLIFVLT 63>NP_694858 Length = 890 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 48 NYLIFVLT 55>NP_001129668 Length = 897 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 46 NYLIFVLT 53>NP_056288 Length = 2046 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV TL Sbjct: 312 AYVVFVSTL 320>NP_001129667 Length = 887 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 46 NYLIFVLT 53>NP_038461 Length = 887 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 46 NYLIFVLT 53>NP_001158051 Length = 167 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SYIVFVLTL 9 SY++FVL++ Sbjct: 142 SYVLFVLSI 150>XP_006726675 Length = 167 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SYIVFVLTL 9 SY++FVL++ Sbjct: 142 SYVLFVLSI 150>XP_005248557 Length = 890 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 48 NYLIFVLT 55>XP_005248558 Length = 866 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SYIVFVLT 8 +Y++FVLT Sbjct: 56 NYLIFVLT 63>NP_066918 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 Y+VFVL L Sbjct: 29 YVVFVLLL 36>XP_006712194 Length = 362 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 Y+VFVL L Sbjct: 29 YVVFVLLL 36>XP_006712193 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 Y+VFVL L Sbjct: 29 YVVFVLLL 36>XP_006712192 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 Y+VFVL L Sbjct: 29 YVVFVLLL 36>XP_006712191 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 Y+VFVL L Sbjct: 29 YVVFVLLL 36>NP_066954 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 YI F+LTL Sbjct: 48 YIGFILTL 55>NP_821067 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 YI F+LTL Sbjct: 48 YIGFILTL 55>NP_001180326 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 YI F+LTL Sbjct: 13 YIGFILTL 20>NP_821070 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 YI F+LTL Sbjct: 48 YIGFILTL 55>NP_821068 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YIVFVLTL 9 YI F+LTL Sbjct: 48 YIGFILTL 55>NP_694996 Length = 2526 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YIVFVLTL 9 Y++FV++L Sbjct: 2109 YVIFVISL 2116>NP_001265227 Length = 2614 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YIVFVLTL 9 Y++FV++L Sbjct: 2109 YVIFVISL 2116>NP_001274152 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 S+I+FV+ L Sbjct: 1060 SFIIFVILL 1068>NP_073732 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+ FVL+L Sbjct: 37 TYVYFVLSL 45>NP_001243328 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+ FVL+L Sbjct: 37 TYVYFVLSL 45>NP_001274426 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YIVFVLTL 9 +I+F+LTL Sbjct: 309 HIIFLLTL 316>NP_071929 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YIVFVLTL 9 +I+F+LTL Sbjct: 309 HIIFLLTL 316>NP_001489 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV+ L Sbjct: 440 AYVVFVVLL 448>NP_054858 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 S+I+FV+ L Sbjct: 1060 SFIIFVILL 1068>NP_114141 Length = 5635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 S +VFVLT Sbjct: 165 SQVVFVLT 172>NP_057323 Length = 3530 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 YIVFVLT 8 Y++FV+T Sbjct: 3254 YVIFVVT 3260>NP_001184044 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+VFV+ L Sbjct: 402 AYVVFVVLL 410>XP_006726569 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 S +VFVLT Sbjct: 160 SQVVFVLT 167>XP_005256732 Length = 3531 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 YIVFVLT 8 Y++FV+T Sbjct: 3255 YVIFVVT 3261>XP_006717414 Length = 5100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 S +VFVLT Sbjct: 162 SQVVFVLT 169>XP_005250584 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YIVFVLTL 9 +I+F+LTL Sbjct: 309 HIIFLLTL 316>XP_006710281 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 S +VFVLT Sbjct: 133 SQVVFVLT 140>NP_001243330 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 +Y+ FVL+L Sbjct: 37 TYVYFVLSL 45>NP_000320 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 +YIVFV T Sbjct: 248 NYIVFVET 255>NP_004358 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVFVLTL 9 I+FVLTL Sbjct: 93 ILFVLTL 99>NP_113597 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IVFVLTL 9 I+FVLTL Sbjct: 93 ILFVLTL 99>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>NP_001157932 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 SYI F+L+ Sbjct: 301 SYIYFILS 308>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYIVFVLTL 9 SYI +V+T+ Sbjct: 114 SYINYVITM 122>XP_006710874 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SYIVFVLT 8 +YIVFV T Sbjct: 292 NYIVFVET 299>NP_001005501 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SYIVFVLTL 9 S ++F LTL Sbjct: 158 SQVIFALTL 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.156 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,079 Number of extensions: 586 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |