Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000360 19 665 XP_005268094 19 665 NP_061875 18 1482 XP_005264434 18 1482 XP_005264433 18 1482 XP_005264432 18 1482 XP_005264431 18 1482 NP_116248 17 4312 NP_001229734 17 4312 NP_001229739 17 4312 NP_002255 17 4312 NP_001229735 17 4312 NP_001230396 17 4312 NP_061834 17 4312 NP_001001895 17 4312 XP_005247496 17 4312 XP_005247494 17 4312 XP_006710921 17 4312 XP_006710920 17 4312 XP_006710919 17 4312 XP_006710918 17 4312 XP_006710917 17 4312 XP_005271208 17 4312 XP_006710916 17 4312 XP_005270768 17 4312 NP_001717 17 4312 NP_997072 17 4312 NP_036448 17 4312 NP_899232 16 5631 NP_001274152 16 7355 NP_057332 16 7355 NP_054858 16 7355 XP_005266307 16 7355 XP_005266306 16 7355 XP_005266305 16 7355 XP_005266304 16 7355 XP_005267021 16 7355 XP_006715537 16 7355 NP_002260 16 7355 NP_008835 15 9605 NP_001075109 15 9605 NP_001182502 15 9605 NP_001258211 15 9605 NP_003831 15 9605 NP_085124 15 9605 NP_803187 15 9605 NP_899243 15 9605 NP_001432 15 9605 NP_443179 15 9605 NP_115971 15 9605 NP_065784 15 9605 NP_004496 15 9605 XP_006724608 15 9605 XP_006724606 15 9605 XP_005266703 15 9605 XP_005256902 15 9605 XP_006720135 15 9605 XP_006720134 15 9605 XP_006720133 15 9605 XP_005247723 15 9605>NP_000360 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SYAKVSNCL 9 SYAKVS CL Sbjct: 562 SYAKVSICL 570>XP_005268094 Length = 764 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SYAKVSNCL 9 SYAKVS CL Sbjct: 562 SYAKVSICL 570>NP_061875 Length = 926 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAKVSNC 8 Y+K+SNC Sbjct: 739 YSKISNC 745>XP_005264434 Length = 843 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAKVSNC 8 Y+K+SNC Sbjct: 656 YSKISNC 662>XP_005264433 Length = 899 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAKVSNC 8 Y+K+SNC Sbjct: 712 YSKISNC 718>XP_005264432 Length = 899 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAKVSNC 8 Y+K+SNC Sbjct: 712 YSKISNC 718>XP_005264431 Length = 928 Score = 18.1 bits (35), Expect = 1482 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YAKVSNC 8 Y+K+SNC Sbjct: 741 YSKISNC 747>NP_116248 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SYAKVSNC 8 SY K+S C Sbjct: 249 SYRKISQC 256>NP_001229734 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>NP_001229739 Length = 874 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 15 YAKASECI 22>NP_002255 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 +AKVS CL Sbjct: 249 FAKVSPCL 256>NP_001229735 Length = 951 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>NP_001230396 Length = 526 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 YAKVSN L Sbjct: 9 YAKVSNKL 16>NP_061834 Length = 661 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 YAKVSN L Sbjct: 9 YAKVSNKL 16>NP_001001895 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 YAKVSN L Sbjct: 9 YAKVSNKL 16>XP_005247496 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 +AKVS CL Sbjct: 48 FAKVSPCL 55>XP_005247494 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 +AKVS CL Sbjct: 249 FAKVSPCL 256>XP_006710921 Length = 668 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_006710920 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_006710919 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_006710918 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_006710917 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_005271208 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_006710916 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>XP_005270768 Length = 566 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 +AKVS CL Sbjct: 277 FAKVSPCL 284>NP_001717 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>NP_997072 Length = 947 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YAKVSNCL 9 YAK S C+ Sbjct: 88 YAKASECI 95>NP_036448 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YAKVSNCL 9 +AKVS CL Sbjct: 247 FAKVSPCL 254>NP_899232 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 YAKVSNC 8 YA++ NC Sbjct: 215 YAEIENC 221>NP_001274152 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SYAKVSNCL 9 S+A V NC+ Sbjct: 652 SFADVMNCV 660>NP_057332 Length = 1901 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKVSNCL 9 AKV NC+ Sbjct: 1275 AKVRNCM 1281>NP_054858 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SYAKVSNCL 9 S+A V NC+ Sbjct: 652 SFADVMNCV 660>XP_005266307 Length = 1796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKVSNCL 9 AKV NC+ Sbjct: 1275 AKVRNCM 1281>XP_005266306 Length = 1824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKVSNCL 9 AKV NC+ Sbjct: 1275 AKVRNCM 1281>XP_005266305 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKVSNCL 9 AKV NC+ Sbjct: 1230 AKVRNCM 1236>XP_005266304 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 AKVSNCL 9 AKV NC+ Sbjct: 1275 AKVRNCM 1281>XP_005267021 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYAKVSNCL 9 +++KVS CL Sbjct: 246 NFSKVSPCL 254>XP_006715537 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYAKVSNCL 9 +++KVS CL Sbjct: 249 NFSKVSPCL 257>NP_002260 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SYAKVSNCL 9 +++KVS CL Sbjct: 249 NFSKVSPCL 257>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SYAKVSNC 8 SY ++S+C Sbjct: 3279 SYCRLSHC 3286>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SYAKVSNC 8 SY ++S+C Sbjct: 3279 SYCRLSHC 3286>NP_001182502 Length = 1829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KVSNC 8 KVSNC Sbjct: 1350 KVSNC 1354>NP_001258211 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KVSNC 8 KVSNC Sbjct: 1350 KVSNC 1354>NP_003831 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KVSNC 8 KVSNC Sbjct: 168 KVSNC 172>NP_085124 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KVSNC 8 KVSNC Sbjct: 1350 KVSNC 1354>NP_803187 Length = 1922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KVSNC 8 KVSNC Sbjct: 1350 KVSNC 1354>NP_899243 Length = 1977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y KV CL Sbjct: 441 YKKVGECL 448>NP_001432 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SYAKVSNCL 9 SY + NCL Sbjct: 492 SYTMLYNCL 500>NP_443179 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y K S CL Sbjct: 2069 YQKTSGCL 2076>NP_115971 Length = 1604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SYAKVSNC 8 +YAK NC Sbjct: 1529 TYAKNPNC 1536>NP_065784 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SYAKVSN 7 SY K+SN Sbjct: 586 SYIKISN 592>NP_004496 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SYAKVSNC 8 +YAK NC Sbjct: 1331 TYAKNPNC 1338>XP_006724608 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SYAKVSNCL 9 SY K +CL Sbjct: 53 SYCKAVSCL 61>XP_006724606 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SYAKVSNCL 9 SY K +CL Sbjct: 100 SYCKAVSCL 108>XP_005266703 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y K S CL Sbjct: 1400 YQKTSGCL 1407>XP_005256902 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SYAKVSNC 8 +YAK NC Sbjct: 1331 TYAKNPNC 1338>XP_006720135 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y KV CL Sbjct: 441 YKKVGECL 448>XP_006720134 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y KV CL Sbjct: 441 YKKVGECL 448>XP_006720133 Length = 1969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YAKVSNCL 9 Y KV CL Sbjct: 441 YKKVGECL 448>XP_005247723 Length = 1481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SYAKVSN 7 SY K+SN Sbjct: 686 SYIKISN 692Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.121 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 480,841 Number of extensions: 637 Number of successful extensions: 60 Number of sequences better than 10000.0: 60 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |