Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 18 1482 NP_001005279 17 3301 NP_060224 17 4312 NP_055919 17 4312 XP_005273907 17 4312 XP_005273906 17 4312 XP_006715189 17 4312 XP_006715188 17 4312 NP_000670 16 5631 NP_054891 16 5631 NP_001274271 16 5631 NP_001129333 16 5631 NP_001274272 16 5631 XP_005265876 16 5631 XP_006714884 16 5631 XP_005265875 16 5631 NP_001121369 16 7355 NP_056087 16 7355 NP_777361 16 7355 NP_055483 16 7355 NP_150646 16 7355 NP_150645 16 7355 NP_005440 16 7355 NP_001180267 16 7355 XP_005260116 16 7355 XP_005260115 16 7355 XP_006722936 16 7355 XP_005255928 16 7355 XP_005255927 16 7355 XP_005255926 16 7355 XP_005255925 16 7355 XP_005255924 16 7355 XP_005252365 16 7355 XP_006716356 16 7355 XP_005273471 16 7355 XP_006716355 16 7355 XP_005246254 16 7355 XP_005246253 16 7355 XP_005246252 16 7355 XP_006711970 16 7355 XP_006711969 16 7355 XP_005246249 16 7355 XP_006711968 16 7355 XP_006711967 16 7355 XP_005273408 16 7355 NP_150647 16 7355 NP_000671 16 7355 NP_001005492 16 7355 NP_003611 15 9605 NP_775797 15 9605 NP_775751 15 9605 NP_647450 15 9605 NP_003877 15 9605 NP_004434 15 9605 XP_006720124 15 9605 XP_005267429 15 9605 XP_006720123 15 9605 NP_597704 15 9605 NP_001005284 15 9605>NP_115803 Length = 1156 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVTLRVHSA 9 SVT RVHSA Sbjct: 27 SVTPRVHSA 35>NP_001005279 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVTLRVHSA 9 +V LR+HSA Sbjct: 224 AVILRIHSA 232>NP_060224 Length = 1440 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVTLRVHS 8 S+T+++HS Sbjct: 131 SITIKIHS 138>NP_055919 Length = 1938 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 VTLR+H A Sbjct: 1065 VTLRLHKA 1072>XP_005273907 Length = 1930 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 VTLR+H A Sbjct: 1057 VTLRLHKA 1064>XP_005273906 Length = 1932 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 VTLR+H A Sbjct: 1057 VTLRLHKA 1064>XP_006715189 Length = 1240 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVTLRVHS 8 S+T+++HS Sbjct: 131 SITIKIHS 138>XP_006715188 Length = 1400 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVTLRVHS 8 S+T+++HS Sbjct: 131 SITIKIHS 138>NP_000670 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLRVHS 8 +TLR+HS Sbjct: 251 LTLRIHS 257>NP_054891 Length = 125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 V +RVHSA Sbjct: 23 VLIRVHSA 30>NP_001274271 Length = 127 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 V +RVHSA Sbjct: 23 VLIRVHSA 30>NP_001129333 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 V +RVHSA Sbjct: 23 VLIRVHSA 30>NP_001274272 Length = 125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLRVHSA 9 V +RVHSA Sbjct: 23 VLIRVHSA 30>XP_005265876 Length = 328 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLRVHS 8 +TLR+HS Sbjct: 251 LTLRIHS 257>XP_006714884 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLRVHS 8 +TLR+HS Sbjct: 251 LTLRIHS 257>XP_005265875 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLRVHS 8 +TLR+HS Sbjct: 251 LTLRIHS 257>NP_001121369 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 677 TITLEVHQA 685>NP_056087 Length = 1315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 677 TITLEVHQA 685>NP_777361 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTLRVHSA 9 V++RVH+A Sbjct: 35 VSIRVHNA 42>NP_055483 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1747 LRVHSA 1752>NP_150646 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>NP_150645 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>NP_005440 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLRVHS 8 VTL VHS Sbjct: 118 VTLNVHS 124>NP_001180267 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLRVHS 8 VTL VHS Sbjct: 118 VTLNVHS 124>XP_005260116 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVTLRVH 7 S TLR+H Sbjct: 246 SATLRIH 252>XP_005260115 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVTLRVH 7 S TLR+H Sbjct: 260 SATLRIH 266>XP_006722936 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVTLRVH 7 S TLR+H Sbjct: 263 SATLRIH 269>XP_005255928 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 92 TITLEVHQA 100>XP_005255927 Length = 1195 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 681 TITLEVHQA 689>XP_005255926 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 677 TITLEVHQA 685>XP_005255925 Length = 1273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 681 TITLEVHQA 689>XP_005255924 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVTLRVHSA 9 ++TL VH A Sbjct: 677 TITLEVHQA 685>XP_005252365 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVTLRVHS 8 SVTL +HS Sbjct: 13 SVTLAMHS 20>XP_006716356 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>XP_005273471 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>XP_006716355 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>XP_005246254 Length = 947 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 745 LRVHSA 750>XP_005246253 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 836 LRVHSA 841>XP_005246252 Length = 1850 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1648 LRVHSA 1653>XP_006711970 Length = 1948 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1746 LRVHSA 1751>XP_006711969 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1747 LRVHSA 1752>XP_005246249 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1747 LRVHSA 1752>XP_006711968 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1747 LRVHSA 1752>XP_006711967 Length = 1949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LRVHSA Sbjct: 1747 LRVHSA 1752>XP_005273408 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VTLRVHS 8 VTL VHS Sbjct: 118 VTLNVHS 124>NP_150647 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>NP_000671 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VTLRVH 7 VTLR+H Sbjct: 232 VTLRIH 237>NP_001005492 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRVHSA 9 +LR+HSA Sbjct: 225 SLRIHSA 231>NP_003611 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVTLRVHSA 9 ++TLR+H + Sbjct: 481 ALTLRIHDS 489>NP_775797 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLRVHSA 9 VTL VH A Sbjct: 127 VTLSVHDA 134>NP_775751 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVTLRVH 7 S TLRVH Sbjct: 320 SETLRVH 326>NP_647450 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRVHSA 9 TL+VHS+ Sbjct: 342 TLKVHSS 348>NP_003877 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRVHSA 9 TL+VHS+ Sbjct: 351 TLKVHSS 357>NP_004434 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TLRVHSA 9 TLR+HS+ Sbjct: 458 TLRLHSS 464>XP_006720124 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLRVHSA 9 VTL VH A Sbjct: 41 VTLSVHDA 48>XP_005267429 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLRVHSA 9 VTL VH A Sbjct: 127 VTLSVHDA 134>XP_006720123 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VTLRVHSA 9 VTL VH A Sbjct: 127 VTLSVHDA 134>NP_597704 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVTLRVH 7 SVTL +H Sbjct: 5 SVTLEIH 11>NP_001005284 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LRVHSA 9 LR+HSA Sbjct: 241 LRIHSA 246Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.118 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 539,755 Number of extensions: 683 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |