Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1482 NP_001120972 18 1482 XP_006716054 18 1482 XP_006716053 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_570843 17 2528 NP_001128529 17 2528 NP_001137357 16 7355 NP_001137358 16 7355 NP_001231921 16 7355 NP_001231919 16 7355 NP_002471 16 7355 NP_060959 16 7355 XP_005268948 16 7355 XP_005268946 16 7355 XP_005268944 16 7355 XP_005268945 16 7355 XP_005268943 16 7355 XP_005268942 16 7355 XP_005245394 16 7355 XP_005245393 16 7355 XP_006711515 16 7355 XP_006711514 16 7355 XP_006711513 16 7355 NP_490647 15 9605 NP_005485 15 9605 NP_001244119 15 9605 NP_742017 15 9605 XP_006716259 15 9605 XP_006716258 15 9605 XP_005250789 15 9605 XP_005250788 15 9605 XP_005250787 15 9605 XP_005250786 15 9605 XP_006716257 15 9605 XP_005250785 15 9605 XP_005250784 15 9605 XP_005250783 15 9605 XP_006715886 15 9605 XP_005249573 15 9605 XP_005249572 15 9605>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 988 SVSPTTEMV 996>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 1006 SVSPTTEMV 1014>XP_006716054 Length = 960 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 558 SVSPTTEMV 566>XP_006716053 Length = 960 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 558 SVSPTTEMV 566>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 1007 SVSPTTEMV 1015>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVSSTTEMV 9 SVS TTEMV Sbjct: 1025 SVSPTTEMV 1033>NP_570843 Length = 581 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 SVSSTTE+ Sbjct: 501 SVSSTTEL 508>NP_001128529 Length = 587 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 SVSSTTE+ Sbjct: 507 SVSSTTEL 514>NP_001137357 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>NP_001137358 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 568 TVSSTTEV 575>NP_001231921 Length = 974 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 599 TVSSTTEV 606>NP_001231919 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>NP_002471 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>NP_060959 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>XP_005268948 Length = 990 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 599 TVSSTTEV 606>XP_005268946 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>XP_005268944 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>XP_005268945 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>XP_005268943 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 643 TVSSTTEV 650>XP_005268942 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVSSTTEM 8 +VSSTTE+ Sbjct: 655 TVSSTTEV 662>XP_005245394 Length = 1741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>XP_005245393 Length = 2663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>XP_006711515 Length = 2904 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>XP_006711514 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>XP_006711513 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSSTTEMV 9 +SSTTE++ Sbjct: 585 LSSTTELI 592>NP_490647 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVSSTTEMV 9 S+S++T+MV Sbjct: 190 SISTSTKMV 198>NP_005485 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVSSTTEMV 9 S+S++T+MV Sbjct: 190 SISTSTKMV 198>NP_001244119 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>NP_742017 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_006716259 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_006716258 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250789 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250788 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250787 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250786 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_006716257 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250785 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 899 NVSSTTE 905>XP_005250784 Length = 1190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 1105 NVSSTTE 1111>XP_005250783 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVSSTTE 7 +VSSTTE Sbjct: 1164 NVSSTTE 1170>XP_006715886 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVSSTTEMV 9 S+S++T+MV Sbjct: 190 SISTSTKMV 198>XP_005249573 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVSSTTEMV 9 S+S++T+MV Sbjct: 190 SISTSTKMV 198>XP_005249572 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVSSTTEMV 9 S+S++T+MV Sbjct: 190 SISTSTKMV 198Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.285 0.0926 0.191 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 292,274 Number of extensions: 481 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |