Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 18 1482 NP_001087241 18 1482 XP_005265799 18 1482 XP_005265798 18 1482 XP_005265797 18 1482 NP_064716 17 3301 NP_057006 17 4312 NP_001123237 17 4312 NP_940912 17 4312 XP_006724887 17 4312 NP_001747 16 5631 NP_689758 16 7355 XP_005262834 16 7355 XP_006714175 16 7355 XP_005262833 16 7355 NP_002221 15 9605 NP_068831 15 9605 NP_065816 15 9605 NP_694984 15 9605 NP_056234 15 9605 NP_002026 15 9605 XP_005262172 15 9605 XP_005262170 15 9605 XP_005274542 15 9605 XP_005266734 15 9605 XP_006722496 15 9605 XP_006721941 15 9605 XP_006721940 15 9605 XP_006721939 15 9605 XP_006721938 15 9605 XP_006721937 15 9605 XP_006721936 15 9605 XP_006721935 15 9605 XP_006721934 15 9605 XP_005257370 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_000929 15 9605>NP_000213 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 SVRIN VGS Sbjct: 954 SVRINSVGS 962>NP_001087241 Length = 972 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 SVRIN VGS Sbjct: 950 SVRINSVGS 958>XP_005265799 Length = 973 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 SVRIN VGS Sbjct: 951 SVRINSVGS 959>XP_005265798 Length = 976 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 SVRIN VGS Sbjct: 954 SVRINSVGS 962>XP_005265797 Length = 977 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 SVRIN VGS Sbjct: 955 SVRINSVGS 963>NP_064716 Length = 578 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRINYVG 8 +RINY+G Sbjct: 166 IRINYLG 172>NP_057006 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RINYVGS 9 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_001123237 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RINYVGS 9 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_940912 Length = 1313 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRINYVG 8 VR+NY+G Sbjct: 477 VRLNYLG 483>XP_006724887 Length = 373 Score = 16.5 bits (31), Expect = 4312 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RINYVGS 9 R+NY+G+ Sbjct: 119 RVNYIGT 125>NP_001747 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRINYVGS 9 V++NYVG+ Sbjct: 253 VQMNYVGN 260>NP_689758 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RINYVG 8 R+NY+G Sbjct: 220 RLNYIG 225>XP_005262834 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RINYVG 8 R+NY+G Sbjct: 178 RLNYIG 183>XP_006714175 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RINYVG 8 R+NY+G Sbjct: 179 RLNYIG 184>XP_005262833 Length = 472 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 RINYVG 8 R+NY+G Sbjct: 219 RLNYIG 224>NP_002221 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>NP_068831 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>NP_694984 Length = 1802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRINYVGS 9 +RI Y+GS Sbjct: 342 IRIYYLGS 349>NP_056234 Length = 2828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 +V +NYVG+ Sbjct: 1528 NVFLNYVGN 1536>NP_002026 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 INYVGS 9 INY+GS Sbjct: 144 INYLGS 149>XP_005262172 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRINYVGS 9 +RI Y+GS Sbjct: 171 IRIYYLGS 178>XP_005262170 Length = 1752 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRINYVGS 9 +RI Y+GS Sbjct: 342 IRIYYLGS 349>XP_005274542 Length = 2853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 +V +NYVG+ Sbjct: 1553 NVFLNYVGN 1561>XP_005266734 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 INYVGS 9 INY+GS Sbjct: 144 INYLGS 149>XP_006722496 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 INYVGS 9 INY+GS Sbjct: 115 INYLGS 120>XP_006721941 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721940 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721939 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721938 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721937 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721936 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 475 SVRLNY 480>XP_006721935 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 492 SVRLNY 497>XP_006721934 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 513 SVRLNY 518>XP_005257370 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVRINY 6 SVR+NY Sbjct: 513 SVRLNY 518>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVRINYVG 8 +VR+NY G Sbjct: 1872 NVRMNYSG 1879>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVRINYVGS 9 +V +N++GS Sbjct: 315 NVALNFIGS 323Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.134 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 424,846 Number of extensions: 485 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |